FFCP PHASE1:Hg19::chr7:129028694..129028708,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:129028694..129028708,+
|short_description=p20@AHCYL2
|description=CAGE_peak_20_at_AHCYL2_5end
|association_with_transcript=46bp_to_ENST00000491079_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23382 | |EntrezGene=23382 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22204 | |HGNC=22204 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=46bp_to_ENST00000491079_5end | |||
|cluster_id=chr7:129028694..129028708,+ | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_20_at_AHCYL2_5end | |||
|id=chr7:129028694..129028708,+ | |||
|ontology_enrichment_celltype=CL:0000148!1.17e-13!10;CL:0000541!1.17e-13!10;CL:0000147!1.12e-09!14;CL:0002605!6.05e-08!3;CL:0002566!4.33e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002566;2.42e-50;1!CL:0000148;8.98e-21;10!CL:0000147;3.53e-15;14!CL:0000149;1.21e-13;4!CL:0000710;5.85e-11;20!CL:0000075;2.18e-08;27!CL:0002077;3.64e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,2.42e-50,1;CL:0000148,8.54e-21,10;CL:0000541,8.54e-21,10;CL:0000147,3.41e-15,14;CL:0000149,1.13e-13,4;CL:0000710,5.70e-11,20;CL:0000075,2.14e-08,27;CL:0002077,7.16e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.76e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.68e-35!57;UBERON:0005068!3.68e-35!57;UBERON:0006241!3.68e-35!57;UBERON:0007135!3.68e-35!57;UBERON:0002791!3.40e-27!33;UBERON:0003075!7.26e-27!86;UBERON:0007284!7.26e-27!86;UBERON:0005743!1.15e-26!86;UBERON:0001893!2.47e-26!34;UBERON:0002020!2.80e-26!34;UBERON:0003528!2.80e-26!34;UBERON:0002346!1.83e-25!90;UBERON:0001017!2.01e-25!82;UBERON:0002616!3.87e-24!59;UBERON:0001869!4.13e-24!32;UBERON:0000073!1.01e-23!94;UBERON:0001016!1.01e-23!94;UBERON:0000955!2.23e-22!69;UBERON:0006238!2.23e-22!69;UBERON:0002780!1.88e-21!41;UBERON:0001890!1.88e-21!41;UBERON:0006240!1.88e-21!41;UBERON:0003080!6.94e-21!42;UBERON:0007023!4.59e-19!115;UBERON:0000956!3.40e-18!25;UBERON:0000203!3.40e-18!25;UBERON:0002240!5.82e-17!3;UBERON:0003076!2.31e-16!15;UBERON:0003057!2.31e-16!15;UBERON:0003056!7.10e-16!61;UBERON:0004121!3.26e-15!169;UBERON:0000924!9.68e-15!173;UBERON:0006601!9.68e-15!173;UBERON:0002619!2.74e-13!22;UBERON:0000153!4.61e-13!129;UBERON:0007811!4.61e-13!129;UBERON:0000033!2.11e-12!123;UBERON:0001950!2.63e-11!20;UBERON:0002298!1.64e-10!8;UBERON:0005174!2.23e-10!5;UBERON:0001137!2.23e-10!5;UBERON:0000349!5.23e-10!5;UBERON:0002420!1.14e-09!9;UBERON:0007245!1.14e-09!9;UBERON:0010009!1.14e-09!9;UBERON:0010011!1.14e-09!9;UBERON:0000454!1.14e-09!9;UBERON:0002308!1.19e-09!9;UBERON:0000125!1.19e-09!9;UBERON:0001896!5.64e-08!3;UBERON:0005290!5.64e-08!3;UBERON:0010096!5.64e-08!3;UBERON:0000988!1.17e-07!3;UBERON:0009663!1.82e-07!7;UBERON:0000025!2.78e-07!194;UBERON:0004733!4.85e-07!12;UBERON:0002028!4.85e-07!12;UBERON:0007277!4.85e-07!12;UBERON:0007029!6.80e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.66e-11;5!UBERON:0005388;2.66e-11;5!UBERON:0001802;2.66e-11;5!UBERON:0000970;5.56e-11;20!UBERON:0002104;1.65e-10;21!UBERON:0000020;1.09e-09;23!UBERON:0001032;2.51e-09;24!UBERON:0004456;2.51e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.69e-10,21;UBERON:0002104,1.69e-10,21;UBERON:0000966,1.22e-09,6;UBERON:0005388,1.22e-09,6;UBERON:0001802,1.22e-09,6;UBERON:0000020,2.56e-09,24;UBERON:0001032,2.56e-09,24;UBERON:0004456,2.56e-09,24 | |||
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|short_description=p20@AHCYL2 | |||
}} | }} |
Latest revision as of 05:37, 16 September 2015
Short description: | p20@AHCYL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_AHCYL2_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 46bp_to_ENST00000491079_5end |
EntrezGene: | AHCYL2 |
HGNC: | 22204 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 2.42e-50 | 1 |
melanocyte | 8.54e-21 | 10 |
melanoblast | 8.54e-21 | 10 |
pigment cell | 3.41e-15 | 14 |
visual pigment cell | 1.13e-13 | 4 |
neurecto-epithelial cell | 5.70e-11 | 20 |
columnar/cuboidal epithelial cell | 2.14e-08 | 27 |
ecto-epithelial cell | 7.16e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
eye | 1.69e-10 | 21 |
visual system | 1.69e-10 | 21 |
retina | 1.22e-09 | 6 |
photoreceptor array | 1.22e-09 | 6 |
posterior segment of eyeball | 1.22e-09 | 6 |
sense organ | 2.56e-09 | 24 |
sensory system | 2.56e-09 | 24 |
entire sense organ system | 2.56e-09 | 24 |