FFCP PHASE1:Hg19::chr7:121943677..121943690,+: Difference between revisions
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|id=chr7:121943677..121943690,+
|short_description=p1@LOC154860
|description=CAGE_peak_1_at_LOC154860_5end
|association_with_transcript=-21bp_to_ENST00000428449,NR_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=154860 | |EntrezGene=154860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-21bp_to_ENST00000428449,NR_036484,uc010lko.1_5end | |||
|cluster_id=chr7:121943677..121943690,+ | |||
|coexpression_cluster_id=C398 | |||
|description=CAGE_peak_1_at_LOC154860_5end | |||
|id=chr7:121943677..121943690,+ | |||
|ontology_enrichment_celltype=CL:0000083!9.11e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.33e-32;5!CL:0002321;1.24e-11;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!9.05e-79!10;DOID:3095!5.51e-36!22;DOID:2994!5.51e-36!22;DOID:169!7.79e-16!6;DOID:3193!1.48e-12!2;DOID:962!1.48e-12!2;DOID:4074!2.90e-12!2;DOID:4905!2.90e-12!2;DOID:3498!2.90e-12!2;DOID:1192!8.31e-09!3;DOID:0050687!2.06e-07!143;DOID:1793!9.11e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:171;2.34e-63;10!DOID:3095;2.45e-29;22!DOID:2994;2.45e-29;22!DOID:169;2.22e-27;6!DOID:3193;3.11e-21;2!DOID:962;3.11e-21;2!DOID:1192;1.22e-14;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.53e-63,10;DOID:3095,2.54e-29,22;DOID:2994,2.54e-29,22;DOID:169,2.38e-27,6;DOID:3193,3.11e-21,2;DOID:962,3.11e-21,2;DOID:1192,1.22e-14,3 | |||
|ontology_enrichment_uberon=UBERON:0000013!8.66e-19!5;UBERON:0002410!8.66e-19!5;UBERON:0003714!1.48e-12!2;UBERON:0000010!6.87e-11!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.31e-40;4!UBERON:0000923;3.31e-40;4!UBERON:0010316;3.31e-40;4!UBERON:0005291;3.31e-40;4!UBERON:0000013;1.33e-32;5!UBERON:0002410;1.33e-32;5!UBERON:0002050;1.99e-32;5!UBERON:0005423;1.99e-32;5!UBERON:0003714;3.11e-21;2!UBERON:0000010;1.18e-18;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.44e-32,5;UBERON:0002410,1.44e-32,5;UBERON:0003714,3.11e-21,2;UBERON:0000010,1.24e-18,8 | |||
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|short_description=p1@LOC154860 | |||
}} | }} |
Latest revision as of 23:16, 15 September 2015
Short description: | p1@LOC154860 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC154860_5end |
Coexpression cluster: | C398_neuroepithelioma_neuroectodermal_carcinoid_neuroblastoma_spinal_brain_synovial |
Association with transcript: | -21bp_to_ENST00000428449, NR_036484, uc010lko.1_5end |
EntrezGene: | LOC154860 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.44e-32 | 5 |
autonomic nervous system | 1.44e-32 | 5 |
neural tissue | 3.11e-21 | 2 |
peripheral nervous system | 1.24e-18 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.53e-63 | 10 |
germ cell and embryonal cancer | 2.54e-29 | 22 |
germ cell cancer | 2.54e-29 | 22 |
neuroendocrine tumor | 2.38e-27 | 6 |
peripheral nerve sheath neoplasm | 3.11e-21 | 2 |
neurofibroma | 3.11e-21 | 2 |
peripheral nervous system neoplasm | 1.22e-14 | 3 |