FFCP PHASE1:Hg19::chr7:116339604..116339623,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:116339604..116339623,+
|short_description=p13@MET
|description=CAGE_peak_13_at_MET_5end
|association_with_transcript=156bp_to_AF075090_5end
|EntrezGene=42...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4233 | |EntrezGene=4233 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7029 | |HGNC=7029 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=156bp_to_AF075090_5end | |||
|cluster_id=chr7:116339604..116339623,+ | |||
|description=CAGE_peak_13_at_MET_5end | |||
|id=chr7:116339604..116339623,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.95e-21!254;CL:0002076!1.01e-09!43;CL:0000223!2.74e-09!59;CL:0000220!6.61e-08!246;CL:0002321!1.27e-07!248;CL:0000710!2.37e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0002231;2.59e-12;3!CL:0002076;8.09e-09;42!CL:0000622;2.57e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,2.04e-12,3;CL:0000066,3.10e-12,253;CL:0002076,9.23e-11,42;CL:0000223,6.25e-10,58;CL:0000076,2.51e-07,63;CL:0000622,2.70e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.73e-10!106;DOID:0050687!3.89e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:4468;4.87e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.29e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.17e-10!169;UBERON:0000925!1.17e-10!169;UBERON:0006595!1.17e-10!169;UBERON:0001007!3.91e-08!155;UBERON:0001555!3.91e-08!155;UBERON:0007026!3.91e-08!155;UBERON:0005911!3.62e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p13@MET | |||
}} | }} |
Latest revision as of 18:26, 15 September 2015
Short description: | p13@MET |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_MET_5end |
Coexpression cluster: | NA |
Association with transcript: | 156bp_to_AF075090_5end |
EntrezGene: | MET |
HGNC: | 7029 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 2.04e-12 | 3 |
epithelial cell | 3.10e-12 | 253 |
endo-epithelial cell | 9.23e-11 | 42 |
endodermal cell | 6.25e-10 | 58 |
squamous epithelial cell | 2.51e-07 | 63 |
acinar cell | 2.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.29e-09 | 2 |