FFCP PHASE1:Hg19::chr7:114556667..114556679,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:114556667..114556679,+
|short_description=p@chr7:114556667..114556679,+
|description=CAGE_peak_at_chr7:114556667..114556679,+
|association_with_transcript=...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:114556667..114556679,+ | |||
|coexpression_cluster_id=C631 | |||
|description=CAGE_peak_at_chr7:114556667..114556679,+ | |||
|id=chr7:114556667..114556679,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.93e-36!24;CL:0000826!1.93e-36!24;CL:0000542!3.30e-24!53;CL:0000051!3.30e-24!53;CL:0000838!2.34e-21!52;CL:0000785!9.83e-14!2;CL:0000955!9.83e-14!2;CL:0000818!9.83e-14!2;CL:0000954!9.83e-14!2;CL:0000816!9.83e-14!2;CL:0002087!1.47e-13!119;CL:0000738!2.03e-12!140;CL:0000236!2.43e-11!14;CL:0002031!2.88e-11!124;CL:0002032!5.80e-10!165;CL:0000837!5.80e-10!165;CL:0000817!1.89e-09!3;CL:0000037!2.10e-09!172;CL:0000566!2.10e-09!172;CL:0000988!1.11e-08!182;CL:0000946!5.22e-08!1;CL:0000786!5.22e-08!1;CL:0000980!5.22e-08!1;CL:0000819!2.04e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000946;1.78e-29;1!CL:0000786;1.78e-29;1!CL:0000945;1.83e-19;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,1.78e-29,1;CL:0000786,1.78e-29,1;CL:0000980,1.78e-29,1;CL:0000945,1.83e-19,24;CL:0000826,1.83e-19,24;CL:0000785,1.78e-15,2;CL:0000955,1.78e-15,2;CL:0000818,1.78e-15,2;CL:0000954,1.78e-15,2;CL:0000816,1.78e-15,2;CL:0000542,9.72e-14,53;CL:0000051,9.72e-14,53;CL:0000817,8.99e-11,3;CL:0000838,2.90e-09,52 | |||
|ontology_enrichment_development_v019=CL:0000954;1.78e-15;2 | |||
|ontology_enrichment_disease=DOID:0060058!8.50e-16!10;DOID:630!4.57e-08!1;DOID:0050177!4.57e-08!1;DOID:0050427!4.57e-08!1;DOID:12603!5.96e-08!1;DOID:0060060!1.69e-07!1;DOID:0060061!1.69e-07!1;DOID:8691!1.69e-07!1;DOID:0060073!2.04e-07!1;DOID:8675!2.04e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:630;9.99e-30;1!DOID:0050177;9.99e-30;1!DOID:0050427;9.99e-30;1!DOID:12603;3.16e-29;1!DOID:0060058;2.37e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,9.99e-30,1;DOID:0050177,9.99e-30,1;DOID:0050427,9.99e-30,1;DOID:12603,3.16e-29,1;DOID:0060058,2.24e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!9.23e-22!7;UBERON:0002106!1.77e-19!3;UBERON:0004854!1.77e-19!3;UBERON:0009034!1.77e-19!3;UBERON:0002095!1.77e-19!3;UBERON:0004782!1.77e-19!3;UBERON:0003281!1.77e-19!3;UBERON:0009664!1.77e-19!3;UBERON:0002296!1.77e-19!3;UBERON:0005602!1.77e-19!3;UBERON:0001179!1.77e-19!3;UBERON:0006293!1.77e-19!3;UBERON:0000029!6.37e-08!1;UBERON:0002372!7.76e-08!1;UBERON:0001961!7.76e-08!1;UBERON:0001744!7.76e-08!1;UBERON:0001735!7.76e-08!1;UBERON:0000945!1.28e-07!8;UBERON:0010039!1.28e-07!8;UBERON:0002370!7.75e-07!4;UBERON:0005058!7.75e-07!4;UBERON:0009113!7.75e-07!4;UBERON:0003295!7.75e-07!4;UBERON:0005562!7.75e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;3.16e-29;1!UBERON:0002106;1.09e-10;3!UBERON:0004177;6.39e-07;5!UBERON:0005057;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,4.20e-29,1;UBERON:0002106,9.90e-11,3;UBERON:0004854,9.90e-11,3;UBERON:0009034,9.90e-11,3;UBERON:0002095,9.90e-11,3;UBERON:0004782,9.90e-11,3;UBERON:0003281,9.90e-11,3;UBERON:0009664,9.90e-11,3;UBERON:0002296,9.90e-11,3;UBERON:0005602,9.90e-11,3;UBERON:0001179,9.90e-11,3;UBERON:0006293,9.90e-11,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.492603536699674,0.314843125254717,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0.954053754535364,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67222857613147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93871377475422,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48849806543585,0,8.8908596818054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07421177600403,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.193373663920732,1.89888196257365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.606168477131288,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,7.05250683067112 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.492603536699674,0.314843125254717,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0.954053754535364,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67222857613147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93871377475422,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48849806543585,0,8.8908596818054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07421177600403,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.193373663920732,1.89888196257365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.606168477131288,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,7.05250683067112 | ||
|short_description=p@chr7:114556667..114556679,+ | |||
}} | }} |
Latest revision as of 05:11, 31 July 2015
Short description: | p@chr7:114556667..114556679, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:114556667..114556679, + |
Coexpression cluster: | C631_b_plasma_xeroderma_lymphoma_splenic_Burkitt_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 1.78e-29 | 1 |
plasma cell | 1.78e-29 | 1 |
plasmablast | 1.78e-29 | 1 |
lymphocyte of B lineage | 1.83e-19 | 24 |
pro-B cell | 1.83e-19 | 24 |
mature B cell | 1.78e-15 | 2 |
pre-B-II cell | 1.78e-15 | 2 |
transitional stage B cell | 1.78e-15 | 2 |
small pre-B-II cell | 1.78e-15 | 2 |
immature B cell | 1.78e-15 | 2 |
lymphocyte | 9.72e-14 | 53 |
common lymphoid progenitor | 9.72e-14 | 53 |
precursor B cell | 8.99e-11 | 3 |
lymphoid lineage restricted progenitor cell | 2.90e-09 | 52 |
Ontology term | p-value | n |
---|---|---|
lymph node | 4.20e-29 | 1 |
spleen | 9.90e-11 | 3 |
gastrointestinal system mesentery | 9.90e-11 | 3 |
stomach region | 9.90e-11 | 3 |
mesentery | 9.90e-11 | 3 |
gastrointestinal system serosa | 9.90e-11 | 3 |
mesentery of stomach | 9.90e-11 | 3 |
gut mesentery | 9.90e-11 | 3 |
dorsal mesentery | 9.90e-11 | 3 |
dorsal mesogastrium | 9.90e-11 | 3 |
peritoneal cavity | 9.90e-11 | 3 |
spleen primordium | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 9.99e-30 | 1 |
monogenic disease | 9.99e-30 | 1 |
xeroderma pigmentosum | 9.99e-30 | 1 |
acute leukemia | 3.16e-29 | 1 |
lymphoma | 2.24e-12 | 10 |