FFCP PHASE1:Hg19::chr7:105517021..105517050,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:105517021..105517050,-
|short_description=p3@ATXN7L1
|description=CAGE_peak_3_at_ATXN7L1_5end
|association_with_transcript=0bp_to_ENST00000318724,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=222255 | |EntrezGene=222255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22210 | |HGNC=22210 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULK2,A4D0Q2 | |UniProt=Q9ULK2,A4D0Q2 | ||
|association_with_transcript=0bp_to_ENST00000318724,ENST00000419735,ENST00000481880,NM_020725,NM_152749,uc003vde.2,uc003vdi.2_5end | |||
|cluster_id=chr7:105517021..105517050,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_ATXN7L1_5end | |||
|id=chr7:105517021..105517050,- | |||
|ontology_enrichment_celltype=CL:0000791!3.98e-13!18;CL:0000789!3.98e-13!18;CL:0002420!3.98e-13!18;CL:0002419!3.98e-13!18;CL:0000790!3.98e-13!18;CL:0000838!8.44e-10!52;CL:0000542!1.01e-09!53;CL:0000051!1.01e-09!53;CL:0000084!1.76e-09!25;CL:0000827!1.76e-09!25;CL:0000625!1.36e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.42e-26;18!CL:0000789;2.42e-26;18!CL:0002419;2.42e-26;18!CL:0000084;2.73e-19;25!CL:0000625;1.37e-16;11!CL:0000624;2.78e-10;6!CL:0000542;3.56e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.06e-26,18;CL:0000789,3.06e-26,18;CL:0002420,3.06e-26,18;CL:0002419,3.06e-26,18;CL:0000790,3.06e-26,18;CL:0000084,3.21e-19,25;CL:0000827,3.21e-19,25;CL:0000625,1.47e-16,11;CL:0000838,1.52e-15,52;CL:0000542,4.47e-15,53;CL:0000051,4.47e-15,53;CL:0000624,2.82e-10,6;CL:0000738,4.35e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;2.42e-26;18!CL:0000051;3.56e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.07e-10!115;UBERON:0000178!2.49e-08!15;UBERON:0000179!2.49e-08!15;UBERON:0000463!2.49e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.40e-17;15!UBERON:0000179;3.40e-17;15!UBERON:0000463;3.40e-17;15!UBERON:0002390;7.94e-15;32!UBERON:0002193;5.09e-12;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.35e-17,15;UBERON:0000179,3.35e-17,15;UBERON:0000463,3.35e-17,15 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0.618831764800233,0,1.34465029290355,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0,0.251085279189606,0.152826811495903,0.328402357799783,0.314843125254717,3.93364276848904,5.75744097145819,2.63187409637329,0,0.30120591877825,0,0.852139206383318,0,0,2.76997704265939,2.80762226458198,2.82114131930607,0.447830948479849,2.91504299417082,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,0,0,0.224723484445085,0.612167784741805,0,0,0.329851300186716,0.199463657621632,0,0.870627715885752,0,0.622822248995575,0.251248665256743,0,0,1.21079900526674,0,0,0.211255286311942,0,0.209658645508376,0,0.300353785683013,0.16072558669708,0,0.19891667719909,0,0,1.63841583378639,0.889509253863555,1.70692089026603,0.800791974072025,0.574752439954483,1.32208974556972,0.954053754535364,1.1384259382189,0,0.382273228125229,1.32171328579026,0,0,16.7203304596758,9.03924754323079,10.6912779479745,10.1983762188314,15.9701910650459,11.8361951433683,13.6378709885538,6.90744832688076,24.4522903204115,20.3811183016931,28.4344056953266,8.83830106107159,9.10415432919148,1.64437904603676,1.38175008892924,4.92665245749589,15.4218025688543,13.9121230606651,11.4989076185474,6.45863253376127,13.7959377696692,17.1813722741315,14.6751421371312,9.2383970153988,7.81300144627702,8.55406840003537,12.0460095262218,16.1263130054567,13.742379920758,8.99753557767264,10.6746639599736,12.0964045934839,4.81392352410313,7.24122019413995,0,0,0,0.722878304769133,0,0.434539556882471,0,0.973269740605272,0.378139268656271,0.443458794925128,0.351339142772504,0.982343066232845,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0.571994910780128,0,0.39752481473341,0,0.347140501607594,0,0,0.550236083880135,0,1.03366703667732,1.42306505074684,0.66944122552934,2.41697590265488,4.56163263431108,0.976248230192678,0.367663080345869,0,0.17859945656816,0.44905874525234,0.337834441449967,0,0,0.183201743930407,0,0,0.872188104285069,0,0.12663051166458,0.926864265692532,0.860509862246441,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0,0,0.605429710579726,0.576175924479999,0,0.624320153660641,0.570471821544449,0.597794722207204,0.587172493218824,0.161872944368132,0.702254033511242,0.61246251376468,0.61417158655884,0.619954687054593,1.18800285728205,0,1.82032272387605,0,0.505008341862199,0.500474079487857,1.38532057742091,0.438977620880838,0.612975591598039,0.300476117813194,0.113432183160021,0.179389635688862,0.85422955527427,0.423863802319124,0.300091096084402,0.206105058476878,1.03056216018252,0.18611685633159,0.675105328965065,0.584622030967192,1.51460264546469,0.184099797284599,0.161646056818812,1.06502877754984,0.10075209822764,0,0.193260853163297,0.272746120590835,0.286804595389004,0.853815942907168,0.530119073285941,0.813357600086629,0.829288440122964,0.504641701751257,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0.38474715694639,0,2.80483547606892,0.4115740113314,0,2.53510069643662,0.982827216677626,0.590789906681404,1.7658523976586,0,0.171567810298526,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.34779121492523,0.117408694235822,0.721832238805369,0.462985512576611,0,0.790204397959275,0.858486162094873,0.492434012174795,0,0.297262324577456,0,0,0,0.268675568108545,0.581267877027924,0,0.985326475791887,0.352193736052904,0.621984346622316,0.576479813667846,0.88369703398466,0.253991577168676,0,1.17217447210047,1.71072446022705,0,0,0.285826432630578,0.224262168690721,0.87192013766656,0.22001485746285,0.129271715757778,0,0,0.531876233169741,0,1.02882949704857,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0.602878754119172,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.716243852959582,2.01753259188349,14.3832454947407,11.4282614675544,12.1925884465761,0.508189248444927,1.30139853857622,0,0,1.91381625495949,0.749007023947182,0,1.24324654030811,0.12269149171914,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,0.368738337083406,0.955719759148911,0.195801157462741,0,7.85718499266972,7.54999702865159,8.75165973988244,0.303127571446259,0,0,0,0,0.561320188866147,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0.492762936082855,0,0.464841513839837,0.362578348774867,0.601519410909855,0,0.803701137152247,0,0.524497659837696,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0.510281115829547,0,0,0.270946437543853,0.501689773854853,0,0,0,0.438519753291869,0.261435451024901,0.256450125116389,0.328014645699706,0,0.103041011647722,0.54941678891006,0.495056999523528,1.14853107599234,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.537101224341368,0.290033387828457,0.426133137080504,0.356128142586949,0.165284915360978,0,0.638063562472921,0,0,0.31481234683064,0,1.54016790088044,0,0,0.55597265731176,0.143124886741991,1.48863347743867,0,0,0.255897791311334,0.427938988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| ||
|short_description=p3@ATXN7L1 | |||
}} | }} |
Latest revision as of 22:06, 24 September 2015
Short description: | p3@ATXN7L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATXN7L1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000318724, ENST00000419735, ENST00000481880, NM_020725, NM_152749, uc003vde.2, uc003vdi.2_5end |
EntrezGene: | ATXN7L1 |
HGNC: | 22210 |
UniProt: | Q9ULK2A4D0Q2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.06e-26 | 18 |
alpha-beta T cell | 3.06e-26 | 18 |
immature T cell | 3.06e-26 | 18 |
mature T cell | 3.06e-26 | 18 |
immature alpha-beta T cell | 3.06e-26 | 18 |
T cell | 3.21e-19 | 25 |
pro-T cell | 3.21e-19 | 25 |
CD8-positive, alpha-beta T cell | 1.47e-16 | 11 |
lymphoid lineage restricted progenitor cell | 1.52e-15 | 52 |
lymphocyte | 4.47e-15 | 53 |
common lymphoid progenitor | 4.47e-15 | 53 |
CD4-positive, alpha-beta T cell | 2.82e-10 | 6 |
leukocyte | 4.35e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 3.35e-17 | 15 |
haemolymphatic fluid | 3.35e-17 | 15 |
organism substance | 3.35e-17 | 15 |