FFCP PHASE1:Hg19::chr7:100239332..100239336,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:100239332..100239336,-
|short_description=p18@TFR2
|description=CAGE_peak_18_at_TFR2_5end
|association_with_transcript=-131bp_to_uc003uvv.1_5end
|EntrezGe...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7036 | |EntrezGene=7036 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11762 | |HGNC=11762 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UP52 | |UniProt=Q9UP52 | ||
|association_with_transcript=-131bp_to_uc003uvv.1_5end | |||
|cluster_id=chr7:100239332..100239336,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_18_at_TFR2_5end | |||
|id=chr7:100239332..100239336,- | |||
|ontology_enrichment_celltype=CL:0000181!1.97e-53!12;CL:0000417!1.97e-53!12;CL:0000668!1.97e-53!12;CL:0000414!1.97e-53!12;CL:0000412!1.97e-53!12;CL:0000182!1.97e-53!12;CL:0000223!7.55e-11!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.29e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.33e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.18e-11;11!UBERON:0009497;8.71e-10;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.65e-60!19;UBERON:0006925!5.65e-60!19;UBERON:0008836!5.65e-60!19;UBERON:0008835!8.87e-52!22;UBERON:0003894!8.87e-52!22;UBERON:0009854!1.61e-49!23;UBERON:0007499!1.52e-45!25;UBERON:0009497!1.52e-45!25;UBERON:0000015!1.52e-45!25;UBERON:0002423!1.52e-45!25;UBERON:0006235!1.52e-45!25;UBERON:0004161!1.52e-45!25;UBERON:0005057!8.70e-44!26;UBERON:0009856!8.70e-44!26;UBERON:0002365!1.08e-36!31;UBERON:0002330!1.08e-36!31;UBERON:0002368!1.80e-32!35;UBERON:0000949!3.42e-25!45;UBERON:0003929!6.13e-21!54;UBERON:0005172!1.49e-20!55;UBERON:0005173!1.49e-20!55;UBERON:0002530!3.91e-19!59;UBERON:0002417!1.71e-18!61;UBERON:0000916!1.71e-18!61;UBERON:0005911!1.19e-13!82;UBERON:0001041!2.40e-11!98;UBERON:0005177!2.39e-10!107;UBERON:0009569!9.01e-10!113;UBERON:0002405!1.66e-09!115;UBERON:0003914!2.46e-09!118;UBERON:0000466!1.04e-08!126;UBERON:0000077!2.01e-08!130;UBERON:0004921!2.01e-08!129;UBERON:0004185!2.01e-08!129;UBERON:0000490!6.69e-08!138;UBERON:0005256!1.32e-07!143;UBERON:0001007!6.40e-07!155;UBERON:0001555!6.40e-07!155;UBERON:0007026!6.40e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.91e-37;19!UBERON:0006925;1.91e-37;19!UBERON:0002423;1.35e-28;25!UBERON:0002365;4.36e-23;31!UBERON:0002330;4.36e-23;31!UBERON:0002368;5.88e-20;33!UBERON:0000949;1.86e-14;43!UBERON:0005172;1.99e-10;52!UBERON:0005173;1.99e-10;52!UBERON:0002417;4.52e-08;58!UBERON:0000916;4.52e-08;58!UBERON:0002530;1.31e-07;57!UBERON:0001007;1.74e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.65e-37,19;UBERON:0006925,1.65e-37,19;UBERON:0008836,1.65e-37,19;UBERON:0008835,1.78e-32,22;UBERON:0003894,1.78e-32,22;UBERON:0009854,4.34e-31,23;UBERON:0007499,1.20e-28,25;UBERON:0009497,1.20e-28,25;UBERON:0000015,1.20e-28,25;UBERON:0002423,1.20e-28,25;UBERON:0006235,1.20e-28,25;UBERON:0004161,1.20e-28,25;UBERON:0009856,1.45e-27,26;UBERON:0002365,3.34e-23,31;UBERON:0002330,3.34e-23,31;UBERON:0002368,1.32e-20,35;UBERON:0000949,3.99e-16,45;UBERON:0003929,1.67e-13,54;UBERON:0005172,1.67e-13,54;UBERON:0005173,1.67e-13,54;UBERON:0002530,2.17e-12,59;UBERON:0002417,3.45e-12,60;UBERON:0000916,3.45e-12,60;UBERON:0005911,5.32e-09,82;UBERON:0001041,1.69e-08,87;UBERON:0005177,2.36e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,1.96565443335525,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66380584195206,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,1.96565443335525,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66380584195206,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p18@TFR2 | |||
}} | }} |
Latest revision as of 07:59, 20 September 2015
Short description: | p18@TFR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_TFR2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -131bp_to_uc003uvv.1_5end |
EntrezGene: | TFR2 |
HGNC: | 11762 |
UniProt: | Q9UP52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.33e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.65e-37 | 19 |
digestive gland | 1.65e-37 | 19 |
liver bud | 1.65e-37 | 19 |
hepatic diverticulum | 1.78e-32 | 22 |
liver primordium | 1.78e-32 | 22 |
digestive tract diverticulum | 4.34e-31 | 23 |
epithelial sac | 1.20e-28 | 25 |
epithelium of foregut-midgut junction | 1.20e-28 | 25 |
anatomical boundary | 1.20e-28 | 25 |
hepatobiliary system | 1.20e-28 | 25 |
foregut-midgut junction | 1.20e-28 | 25 |
septum transversum | 1.20e-28 | 25 |
sac | 1.45e-27 | 26 |
exocrine gland | 3.34e-23 | 31 |
exocrine system | 3.34e-23 | 31 |
endocrine gland | 1.32e-20 | 35 |
endocrine system | 3.99e-16 | 45 |
gut epithelium | 1.67e-13 | 54 |
abdomen element | 1.67e-13 | 54 |
abdominal segment element | 1.67e-13 | 54 |
gland | 2.17e-12 | 59 |
abdominal segment of trunk | 3.45e-12 | 60 |
abdomen | 3.45e-12 | 60 |
endo-epithelium | 5.32e-09 | 82 |
foregut | 1.69e-08 | 87 |
trunk region element | 2.36e-07 | 101 |