FFCP PHASE1:Hg19::chr6:90062543..90062563,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:90062543..90062563,-
|short_description=p4@UBE2J1
|description=CAGE_peak_4_at_UBE2J1_5end
|association_with_transcript=3bp_to_ENST00000435041_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51465 | |EntrezGene=51465 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17598 | |HGNC=17598 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000435041_5end | |||
|cluster_id=chr6:90062543..90062563,- | |||
|description=CAGE_peak_4_at_UBE2J1_5end | |||
|id=chr6:90062543..90062563,- | |||
|ontology_enrichment_celltype=CL:0000037!6.56e-17!172;CL:0000566!6.56e-17!172;CL:0000738!1.97e-16!140;CL:0000766!2.02e-16!76;CL:0002087!1.46e-15!119;CL:0002032!2.64e-15!165;CL:0000837!2.64e-15!165;CL:0000988!2.83e-15!182;CL:0000945!4.58e-14!24;CL:0000826!4.58e-14!24;CL:0002194!1.20e-13!63;CL:0000576!1.20e-13!63;CL:0000040!1.20e-13!63;CL:0000559!1.20e-13!63;CL:0000557!3.74e-13!71;CL:0002009!4.97e-13!65;CL:0000763!5.52e-13!112;CL:0000049!5.52e-13!112;CL:0002031!1.27e-12!124;CL:0002057!6.36e-12!42;CL:0000839!7.46e-12!70;CL:0000860!3.83e-11!45;CL:0000236!2.06e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.48e-14;24!CL:0000860;1.84e-09;33!CL:0002057;1.84e-09;33!CL:0000473;1.59e-08;39!CL:0000234;1.59e-08;39!CL:0000766;2.55e-08;69!CL:0000576;3.02e-08;48!CL:0000236;3.12e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.14e-17,168;CL:0000766,1.02e-16,72;CL:0000738,2.32e-16,136;CL:0002087,1.53e-15,115;CL:0002032,3.30e-15,161;CL:0000837,3.30e-15,161;CL:0000988,4.79e-15,177;CL:0000945,4.54e-14,24;CL:0000826,4.54e-14,24;CL:0002194,5.95e-14,59;CL:0000576,5.95e-14,59;CL:0000040,5.95e-14,59;CL:0000559,5.95e-14,59;CL:0000557,2.26e-13,67;CL:0002009,2.72e-13,61;CL:0000763,4.91e-13,108;CL:0000049,4.91e-13,108;CL:0002031,1.49e-12,120;CL:0000473,4.08e-12,48;CL:0000234,4.08e-12,48;CL:0000839,4.93e-12,66;CL:0000860,6.32e-12,42;CL:0002057,6.32e-12,42;CL:0000236,2.05e-08,14 | |||
|ontology_enrichment_development_v019=CL:0002057;5.23e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!5.38e-13!86;UBERON:0003081!9.92e-12!216;UBERON:0002371!1.07e-11!80;UBERON:0002193!1.64e-11!112;UBERON:0002390!3.04e-11!102;UBERON:0003061!3.04e-11!102;UBERON:0004765!3.35e-10!101;UBERON:0001434!3.35e-10!101;UBERON:0002405!3.85e-10!115;UBERON:0002204!8.10e-09!167;UBERON:0000926!5.33e-07!448;UBERON:0004120!5.33e-07!448;UBERON:0006603!5.33e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.99e-13,82;UBERON:0002371,8.14e-12,76;UBERON:0002193,1.67e-11,108;UBERON:0002405,2.16e-11,93;UBERON:0002390,2.78e-11,98;UBERON:0003061,2.78e-11,98;UBERON:0004765,1.66e-10,90;UBERON:0003081,5.59e-10,203;UBERON:0001434,2.14e-09,100;UBERON:0002204,4.20e-08,167;UBERON:0000926,3.60e-07,315;UBERON:0004120,3.60e-07,315;UBERON:0006603,3.60e-07,315 | |||
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| ||
|short_description=p4@UBE2J1 | |||
}} | }} |
Latest revision as of 03:30, 20 September 2015
Short description: | p4@UBE2J1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_UBE2J1_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENST00000435041_5end |
EntrezGene: | UBE2J1 |
HGNC: | 17598 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.14e-17 | 168 |
myeloid leukocyte | 1.02e-16 | 72 |
leukocyte | 2.32e-16 | 136 |
nongranular leukocyte | 1.53e-15 | 115 |
hematopoietic oligopotent progenitor cell | 3.30e-15 | 161 |
hematopoietic multipotent progenitor cell | 3.30e-15 | 161 |
hematopoietic cell | 4.79e-15 | 177 |
lymphocyte of B lineage | 4.54e-14 | 24 |
pro-B cell | 4.54e-14 | 24 |
monopoietic cell | 5.95e-14 | 59 |
monocyte | 5.95e-14 | 59 |
monoblast | 5.95e-14 | 59 |
promonocyte | 5.95e-14 | 59 |
granulocyte monocyte progenitor cell | 2.26e-13 | 67 |
macrophage dendritic cell progenitor | 2.72e-13 | 61 |
myeloid cell | 4.91e-13 | 108 |
common myeloid progenitor | 4.91e-13 | 108 |
hematopoietic lineage restricted progenitor cell | 1.49e-12 | 120 |
defensive cell | 4.08e-12 | 48 |
phagocyte | 4.08e-12 | 48 |
myeloid lineage restricted progenitor cell | 4.93e-12 | 66 |
classical monocyte | 6.32e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.32e-12 | 42 |
B cell | 2.05e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.99e-13 | 82 |
bone marrow | 8.14e-12 | 76 |
hemolymphoid system | 1.67e-11 | 108 |
immune system | 2.16e-11 | 93 |
hematopoietic system | 2.78e-11 | 98 |
blood island | 2.78e-11 | 98 |
skeletal element | 1.66e-10 | 90 |
lateral plate mesoderm | 5.59e-10 | 203 |
skeletal system | 2.14e-09 | 100 |
musculoskeletal system | 4.20e-08 | 167 |
mesoderm | 3.60e-07 | 315 |
mesoderm-derived structure | 3.60e-07 | 315 |
presumptive mesoderm | 3.60e-07 | 315 |