FFCP PHASE1:Hg19::chr6:84849274..84849294,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:84849274..84849294,+
|short_description=p@chr6:84849274..84849294,+
|description=CAGE_peak_at_chr6:84849274..84849294,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:84849274..84849294,+ | |||
|coexpression_cluster_id=C557 | |||
|description=CAGE_peak_at_chr6:84849274..84849294,+ | |||
|id=chr6:84849274..84849294,+ | |||
|ontology_enrichment_celltype=CL:0005020!7.26e-16!6;CL:0002138!7.26e-16!6;CL:0005022!7.26e-16!6;CL:0002144!1.79e-12!3;CL:0002139!5.93e-09!24;CL:0000115!3.32e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002144;2.34e-36;3!CL:0002138;6.05e-32;6!CL:0002139;1.06e-23;24!CL:0000115;4.89e-14;36!CL:0002078;1.95e-12;45!CL:0000213;2.70e-09;58!CL:0000215;2.70e-09;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,2.08e-36,3;CL:0005020,7.10e-32,6;CL:0002138,7.10e-32,6;CL:0005022,7.10e-32,6;CL:0002139,1.10e-23,24;CL:0000115,3.35e-20,36;CL:0002078,5.31e-16,45;CL:0000213,3.15e-12,58;CL:0000215,3.15e-12,58 | |||
|ontology_enrichment_development_v019=CL:0005022;6.05e-32;6!UBERON:0010227;3.54e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.47e-18!115;UBERON:0002465!1.14e-17!10;UBERON:0001915!1.79e-12!3;UBERON:0001982!1.79e-12!3;UBERON:0001473!8.36e-12!8;UBERON:0004536!8.36e-12!8;UBERON:0006558!8.36e-12!8;UBERON:0000341!1.44e-08!2;UBERON:0003127!5.29e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;2.34e-36;3!UBERON:0001915;2.34e-36;3!UBERON:0001982;2.34e-36;3!UBERON:0002465;1.90e-29;10!UBERON:0001473;4.66e-24;8!UBERON:0004536;4.66e-24;8!UBERON:0006558;4.66e-24;8!UBERON:0000341;6.02e-24;2!UBERON:0002079;3.54e-13;1!UBERON:0007029;7.24e-13;1!UBERON:0000029;7.24e-13;1!UBERON:0002426;7.24e-13;1!UBERON:0003831;7.24e-13;1!UBERON:0003898;7.24e-13;1!UBERON:0004830;7.24e-13;1!UBERON:0003830;7.24e-13;1!UBERON:0005175;7.24e-13;1!UBERON:0001774;7.24e-13;1!UBERON:0001103;7.24e-13;1!UBERON:0002405;6.67e-11;27!UBERON:0000974;1.26e-08;6!UBERON:0002081;3.18e-07;2!UBERON:0000055;3.86e-07;65!UBERON:0005090;4.55e-07;2!UBERON:0001630;4.55e-07;2!UBERON:0002193;7.63e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,2.08e-36,3;UBERON:0001915,2.08e-36,3;UBERON:0001982,2.08e-36,3;UBERON:0002465,2.20e-29,10;UBERON:0001473,5.24e-24,8;UBERON:0004536,5.24e-24,8;UBERON:0006558,5.24e-24,8;UBERON:0000341,6.77e-24,2;UBERON:0002079,4.23e-13,1;UBERON:0007029,4.77e-13,1;UBERON:0002426,6.82e-13,1;UBERON:0003831,6.82e-13,1;UBERON:0003898,6.82e-13,1;UBERON:0004830,6.82e-13,1;UBERON:0003830,6.82e-13,1;UBERON:0005175,6.82e-13,1;UBERON:0001774,6.82e-13,1;UBERON:0001103,6.82e-13,1;UBERON:0010084,6.82e-13,1;UBERON:0000029,7.68e-13,1;UBERON:0000055,5.75e-08,68;UBERON:0002081,3.48e-07,2;UBERON:0010227,3.48e-07,2;UBERON:0005090,4.42e-07,2;UBERON:0001630,4.42e-07,2;UBERON:0002049,7.37e-07,78;UBERON:0007798,7.37e-07,78 | |||
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| ||
|short_description=p@chr6:84849274..84849294,+ | |||
}} | }} |
Latest revision as of 03:34, 31 July 2015
Short description: | p@chr6:84849274..84849294, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:84849274..84849294, + |
Coexpression cluster: | C557_Lymphatic_Endothelial_mesothelioma_pleomorphic_Cardiac_lung_aorta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 2.08e-36 | 3 |
lymphangioblast | 7.10e-32 | 6 |
endothelial cell of lymphatic vessel | 7.10e-32 | 6 |
vascular lymphangioblast | 7.10e-32 | 6 |
endothelial cell of vascular tree | 1.10e-23 | 24 |
endothelial cell | 3.35e-20 | 36 |
meso-epithelial cell | 5.31e-16 | 45 |
lining cell | 3.15e-12 | 58 |
barrier cell | 3.15e-12 | 58 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 2.08e-36 | 3 |
endothelium of capillary | 2.08e-36 | 3 |
capillary | 2.08e-36 | 3 |
lymphoid system | 2.20e-29 | 10 |
lymphatic vessel | 5.24e-24 | 8 |
lymph vasculature | 5.24e-24 | 8 |
lymphatic part of lymphoid system | 5.24e-24 | 8 |
throat | 6.77e-24 | 2 |
left cardiac atrium | 4.23e-13 | 1 |
surface | 4.77e-13 | 1 |
chest muscle | 6.82e-13 | 1 |
respiratory system muscle | 6.82e-13 | 1 |
skeletal muscle of trunk | 6.82e-13 | 1 |
respiratory system skeletal muscle | 6.82e-13 | 1 |
thoracic segment muscle | 6.82e-13 | 1 |
chest organ | 6.82e-13 | 1 |
muscle of trunk | 6.82e-13 | 1 |
diaphragm | 6.82e-13 | 1 |
future diaphragm | 6.82e-13 | 1 |
lymph node | 7.68e-13 | 1 |
vessel | 5.75e-08 | 68 |
cardiac atrium | 3.48e-07 | 2 |
future cardiac atrium | 3.48e-07 | 2 |
muscle structure | 4.42e-07 | 2 |
muscle organ | 4.42e-07 | 2 |
vasculature | 7.37e-07 | 78 |
vascular system | 7.37e-07 | 78 |