FFCP PHASE1:Hg19::chr6:7910773..7910814,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:7910773..7910814,+
|short_description=p@chr6:7910773..7910814,+
|description=CAGE_peak_at_chr6:7910773..7910814,+
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:7910773..7910814,+ | |||
|coexpression_cluster_id=C4627 | |||
|description=CAGE_peak_at_chr6:7910773..7910814,+ | |||
|id=chr6:7910773..7910814,+ | |||
|ontology_enrichment_celltype=CL:0002139!7.68e-15!24;CL:0000222!3.45e-13!119;CL:0000071!1.28e-12!18;CL:0002546!1.28e-12!18;CL:0000115!1.63e-11!35;CL:0002078!1.94e-10!44;CL:0000213!1.93e-09!57;CL:0000215!1.93e-09!57;CL:0002321!1.39e-08!248;CL:0000220!1.65e-08!246;CL:0000359!2.13e-07!32;CL:0000055!3.15e-07!180;CL:1000413!8.20e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000071;1.38e-27;18!CL:0002139;1.22e-25;24!CL:0000115;8.54e-20;36!CL:0002543;7.61e-15;6!CL:0002078;4.69e-12;45!CL:0000359;1.85e-11;32!CL:0002595;5.26e-11;5!CL:0000213;5.67e-10;58!CL:0000215;5.67e-10;58!CL:1000413;1.43e-09;9!CL:0002144;1.16e-07;3!CL:0002618;1.16e-07;3!CL:0002544;5.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,6.00e-28,18;CL:0002546,6.00e-28,18;CL:0002139,5.65e-26,24;CL:0000115,7.26e-25,36;CL:0000222,3.50e-20,121;CL:0002078,1.19e-18,45;CL:0000213,1.21e-17,58;CL:0000215,1.21e-17,58;CL:0002543,1.36e-14,6;CL:0000359,3.25e-12,32;CL:0002595,1.83e-10,5;CL:1000413,6.99e-10,9;CL:0000076,7.15e-09,63;CL:0000192,3.57e-08,43;CL:0000514,3.57e-08,43;CL:0002144,7.20e-08,3;CL:0002618,2.03e-07,3;CL:0002544,3.58e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.38e-27;18!CL:0000222;5.77e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.84e-18!69;UBERON:0002049!7.07e-18!79;UBERON:0007798!7.07e-18!79;UBERON:0001981!6.85e-17!60;UBERON:0007500!6.85e-17!60;UBERON:0004537!6.85e-17!60;UBERON:0006965!6.85e-17!60;UBERON:0004872!6.79e-16!84;UBERON:0001637!8.44e-13!42;UBERON:0003509!8.44e-13!42;UBERON:0004572!8.44e-13!42;UBERON:0001986!1.28e-12!18;UBERON:0004638!1.28e-12!18;UBERON:0004852!1.28e-12!18;UBERON:0003914!2.24e-12!118;UBERON:0004535!2.36e-12!110;UBERON:0001009!4.29e-12!113;UBERON:0006914!5.00e-12!25;UBERON:0000487!6.04e-12!22;UBERON:0004573!2.68e-10!33;UBERON:0004571!2.68e-10!33;UBERON:0000490!3.21e-09!138;UBERON:0000947!8.16e-08!21;UBERON:0010191!8.16e-08!21;UBERON:0000477!2.93e-07!286;UBERON:0003915!8.20e-07!9;UBERON:0004700!8.20e-07!9;UBERON:0001917!8.20e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.38e-27;18!UBERON:0001986;1.38e-27;18!UBERON:0004852;1.38e-27;18!UBERON:0000487;8.52e-25;22!UBERON:0006914;2.86e-21;25!UBERON:0000055;1.76e-17;65!UBERON:0001637;5.26e-17;42!UBERON:0003509;5.26e-17;42!UBERON:0004572;5.26e-17;42!UBERON:0007500;1.22e-16;56!UBERON:0001981;1.22e-16;56!UBERON:0004537;1.22e-16;56!UBERON:0004573;1.53e-16;33!UBERON:0004571;1.53e-16;33!UBERON:0000490;3.04e-14;33!UBERON:0003914;1.52e-12;74!UBERON:0002049;1.44e-11;75!UBERON:0007798;1.44e-11;75!UBERON:0003513;2.96e-11;7!UBERON:0003834;5.26e-11;5!UBERON:0001533;5.26e-11;5!UBERON:0001638;1.35e-09;9!UBERON:0003920;1.35e-09;9!UBERON:0004582;1.35e-09;9!UBERON:0003915;1.43e-09;9!UBERON:0004700;1.43e-09;9!UBERON:0001917;1.43e-09;9!UBERON:0010523;1.16e-07;3!UBERON:0001915;1.16e-07;3!UBERON:0001982;1.16e-07;3!UBERON:0000947;1.41e-07;21!UBERON:0010191;1.41e-07;21!UBERON:0004535;5.70e-07;109!UBERON:0000025;8.04e-07;93!UBERON:0001009;9.00e-07;112 | |||
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|short_description=p@chr6:7910773..7910814,+ | |||
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Latest revision as of 03:20, 31 July 2015
Short description: | p@chr6:7910773..7910814, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:7910773..7910814, + |
Coexpression cluster: | C4627_lymphangiectasia_Endothelial_Smooth_Renal_hepatic_Lymphatic_lymph |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 6.00e-28 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.00e-28 | 18 |
endothelial cell of vascular tree | 5.65e-26 | 24 |
endothelial cell | 7.26e-25 | 36 |
mesodermal cell | 3.50e-20 | 121 |
meso-epithelial cell | 1.19e-18 | 45 |
lining cell | 1.21e-17 | 58 |
barrier cell | 1.21e-17 | 58 |
vein endothelial cell | 1.36e-14 | 6 |
vascular associated smooth muscle cell | 3.25e-12 | 32 |
smooth muscle cell of the subclavian artery | 1.83e-10 | 5 |
endothelial cell of artery | 6.99e-10 | 9 |
squamous epithelial cell | 7.15e-09 | 63 |
smooth muscle cell | 3.57e-08 | 43 |
smooth muscle myoblast | 3.57e-08 | 43 |
capillary endothelial cell | 7.20e-08 | 3 |
endothelial cell of umbilical vein | 2.03e-07 | 3 |
aortic endothelial cell | 3.58e-07 | 6 |