FFCP PHASE1:Hg19::chr6:57037538..57037554,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:57037538..57037554,+
|short_description=p4@BAG2
|description=CAGE_peak_4_at_BAG2_5end
|association_with_transcript=38bp_to_ENST00000438730_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9532 | |EntrezGene=9532 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=938 | |HGNC=938 | ||
|TSSclassifier=strong | |||
|UniProt=A2A296 | |UniProt=A2A296 | ||
|association_with_transcript=38bp_to_ENST00000438730_5end | |||
|cluster_id=chr6:57037538..57037554,+ | |||
|coexpression_cluster_id=C4619 | |||
|description=CAGE_peak_4_at_BAG2_5end | |||
|id=chr6:57037538..57037554,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.41e-13!180;CL:0000057!3.61e-12!75;CL:0002620!4.09e-09!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.94e-10;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.26e-12,76;CL:0002620,1.24e-10,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.74e-09,160;UBERON:0009142,1.74e-09,160;UBERON:0005256,7.07e-08,122;UBERON:0002329,5.42e-07,71;UBERON:0003059,5.42e-07,71;UBERON:0007282,5.42e-07,71;UBERON:0004290,5.42e-07,71;UBERON:0009618,5.42e-07,71;UBERON:0007524,6.67e-07,73;UBERON:0003101,9.95e-07,22;UBERON:0000079,9.95e-07,22 | |||
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| ||
|short_description=p4@BAG2 | |||
}} | }} |
Latest revision as of 10:37, 19 September 2015
Short description: | p4@BAG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BAG2_5end |
Coexpression cluster: | C4619_smooth_bladder_left_Synoviocyte_Fibroblast_Hep2_heart |
Association with transcript: | 38bp_to_ENST00000438730_5end |
EntrezGene: | BAG2 |
HGNC: | 938 |
UniProt: | A2A296 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.26e-12 | 76 |
skin fibroblast | 1.24e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.74e-09 | 160 |
entire embryonic mesenchyme | 1.74e-09 | 160 |
trunk mesenchyme | 7.07e-08 | 122 |
somite | 5.42e-07 | 71 |
presomitic mesoderm | 5.42e-07 | 71 |
presumptive segmental plate | 5.42e-07 | 71 |
dermomyotome | 5.42e-07 | 71 |
trunk paraxial mesoderm | 5.42e-07 | 71 |
dense mesenchyme tissue | 6.67e-07 | 73 |
male organism | 9.95e-07 | 22 |
male reproductive system | 9.95e-07 | 22 |