FFCP PHASE1:Hg19::chr6:56819790..56819803,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:56819790..56819803,+
|short_description=p6@BEND6
|description=CAGE_peak_6_at_BEND6_5end
|association_with_transcript=17bp_to_ENST00000322055,ENST0000037075...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221336 | |EntrezGene=221336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20871 | |HGNC=20871 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SZK0,Q5SZJ8 | |UniProt=Q5SZK0,Q5SZJ8 | ||
|association_with_transcript=17bp_to_ENST00000322055,ENST00000370750,NM_152731,uc003pdg.2,uc010kab.2_5end | |||
|cluster_id=chr6:56819790..56819803,+ | |||
|description=CAGE_peak_6_at_BEND6_5end | |||
|id=chr6:56819790..56819803,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.09e-24!180;CL:0000057!6.96e-22!75;CL:0002620!3.51e-12!23 | |||
|ontology_enrichment_celltype_v019=CL:0000134;3.65e-12;55!CL:0000048;8.09e-12;58!CL:0000346;1.91e-11;3!CL:1000428;1.91e-11;3!CL:0000723;1.05e-09;61!CL:0000034;7.33e-08;69!CL:0002559;4.94e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,5.61e-12,3;CL:1000428,5.61e-12,3;CL:0002559,2.41e-07,5;CL:0000048,3.47e-07,427;CL:0000057,4.92e-07,76;CL:0000723,5.97e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.59e-12;14!DOID:120;1.04e-07;27!DOID:193;4.37e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.89e-12,14;DOID:120,1.29e-07,27;DOID:193,5.32e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0000475!4.19e-11!365;UBERON:0002097!2.87e-10!40;UBERON:0002199!7.10e-10!45;UBERON:0002416!7.10e-10!45;UBERON:0000914!1.52e-08!83;UBERON:0002329!1.52e-08!83;UBERON:0003077!1.52e-08!83;UBERON:0003059!1.52e-08!83;UBERON:0007282!1.52e-08!83;UBERON:0009618!1.52e-08!83;UBERON:0007285!1.52e-08!83;UBERON:0003102!3.00e-08!95;UBERON:0000033!7.88e-08!123;UBERON:0000955!2.91e-07!69;UBERON:0006238!2.91e-07!69;UBERON:0004121!3.09e-07!169;UBERON:0002067!5.18e-07!9;UBERON:0004016!5.18e-07!9;UBERON:0010083!5.18e-07!9;UBERON:0003075!9.49e-07!86;UBERON:0007284!9.49e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;1.91e-12;5!UBERON:0000412;1.91e-11;3!UBERON:0001992;1.91e-11;3!UBERON:0000992;5.59e-10;13!UBERON:0000991;7.35e-08;21!UBERON:0002073;4.94e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,2.32e-12,5;UBERON:0000412,5.61e-12,3;UBERON:0001992,5.61e-12,3;UBERON:0000992,6.05e-10,13;UBERON:0000991,6.80e-08,21;UBERON:0009196,6.80e-08,21;UBERON:0009117,6.80e-08,21;UBERON:0005564,6.80e-08,21;UBERON:0004176,1.73e-07,22;UBERON:0002073,2.41e-07,5;UBERON:0005086,2.41e-07,5 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.994192127183747,1.34465029290355,0,1.46062018077475,0.487932798790507,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0.50133791063589,0.724232594804119,0,0.486634870302636,0.189069634328136,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,1.41867352879343,0,0,0.74000264525148,0.311211035399766,0.404132016209064,0,0.151357427644931,0,0,0.936480230490962,0.570471821544449,0.448346041655403,0.469737994575059,0.323745888736263,0.702254033511242,1.02077085627447,0,0.826606249406124,1.18800285728205,0.494533858557114,0.910161361938026,0,0.505008341862199,0.250237039743928,0.831192346452549,0.877955241761676,0.919463387397059,1.20190447125277,0.113432183160021,0.179389635688862,0.640672166455702,1.48352330811693,0.300091096084402,1.44273540933814,0.257640540045629,0.930584281657949,0.168776332241266,1.36411807225678,0.252433774244115,1.10459878370759,0.969876340912871,0.710019185033229,2.01504196455281,0.847802961552438,0,0,0,0,0,0,0,0,0,1.56449532329816,1.92972281457866,1.38134921352481,0.464367928031979,0.721879481669586,0.354920400119532,0.168584690078102,0.482022059766964,0,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,1.03993478527958,1.44331342025273,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0.904318131178758,0.871533458600294,0.199945982364114,0,0,0,0.958499421966331,1.14861935834114,2.85273810081437,0.144781306667579,0.205476322550383,0.537182889719687,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0.24538298343828,0,0.813795071099207,0,0.178428988797162,0.157702415033935,0.117141414992713,0.601892199455438,0,0,0,0.553107505625109,1.47702144595741,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0.496215615637554,0,0,0.640695746278505,0.511707249066704,0.804269605718038,0,1.07946785661859,0.710246901252508,1.14978018419333,0.519254429183621,0.348631135379878,0,0,0,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.732555718546747,0.660075999364704,0,0,1.6068392984416,0.386682873168488,0.308097234229289,0,0.137836572484531,0.214840489736547,0.290033387828457,0.170453254832202,0.356128142586949,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,1.73986598415015,0,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0.42793898803392,0.318203247925937,0,0.359744915166629,0,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0.243713489631284,0,0.409499734223957,0,0,1.65409603063837,0.66343897524122,0,0,0,0,0,0,0.143411352204052,0.491245205065606,0,0.354761064070598,0.633322905892992,0.658589785919804,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0.47003968731907,5.01268954180134,0,0,0,0,0,0,0,0,0,1.11362469558097,0,0,0.33307196799782,0,0,0,0.121360521749513,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0.16480387422676,0,0,0,0,0.818149460017238,0.123084805461069,0.311039587661807,0.359473404589307,0.537063524026827,0,0,0,0,0,0.74214478529481,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0.552896299656123,1.47773809476774,0.87754158861589,0,0,0.230850775511391,0.227884111694002,0,0.269272933229316,0.325942115766024,0,0.457987967009312,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0.123563938946503,0,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,0.60129367765797,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0.171986032471617,0,0,0,0,0.0882561266915003,0,0,0.993573058514948,0.823040347426423,0,1.12222348352147,0,0,0,0,0.171594997861965,0.14405479798815,0.248505071130865,0.235694034616795,1.63085047288337,1.255234155748,0.815985741090574,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.364497339948148,0,0,0,0.633602019116439,0.179287339332845,0,0,0,0,0,0.864221491201268,0.326587360109409,3.59190574687462,0,0.511164065356265,0.113312091520126,0,0,1.0342636508924,0.26446520348538,0.171086837884329,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.732157589411779,0.3755727921195,0.573409195690071,0.332787154610557,0.745156835296601,0,0,0.151649117541648,0,0,0,0,1.79105763464249,0.233713309847224,1.66441758450784,1.89403005275089,1.257839508762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| ||
|short_description=p6@BEND6 | |||
}} | }} |
Latest revision as of 10:21, 19 September 2015
Short description: | p6@BEND6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BEND6_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000322055, ENST00000370750, NM_152731, uc003pdg.2, uc010kab.2_5end |
EntrezGene: | BEND6 |
HGNC: | 20871 |
UniProt: | Q5SZK0Q5SZJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 5.61e-12 | 3 |
stem cell of epidermis | 5.61e-12 | 3 |
hair follicle cell | 2.41e-07 | 5 |
multi fate stem cell | 3.47e-07 | 427 |
fibroblast | 4.92e-07 | 76 |
somatic stem cell | 5.97e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
right ovary | 2.32e-12 | 5 |
dermal papilla | 5.61e-12 | 3 |
papillary layer of dermis | 5.61e-12 | 3 |
female gonad | 6.05e-10 | 13 |
gonad | 6.80e-08 | 21 |
indifferent external genitalia | 6.80e-08 | 21 |
indifferent gonad | 6.80e-08 | 21 |
gonad primordium | 6.80e-08 | 21 |
external genitalia | 1.73e-07 | 22 |
hair follicle | 2.41e-07 | 5 |
hair follicle placode | 2.41e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.89e-12 | 14 |
female reproductive organ cancer | 1.29e-07 | 27 |
reproductive organ cancer | 5.32e-07 | 29 |