FFCP PHASE1:Hg19::chr6:56765635..56765674,-: Difference between revisions
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|id=chr6:56765635..56765674,-
|short_description=p@chr6:56765635..56765674,-
|description=CAGE_peak_at_chr6:56765635..56765674,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:56765635..56765674,- | |||
|coexpression_cluster_id=C391 | |||
|description=CAGE_peak_at_chr6:56765635..56765674,- | |||
|id=chr6:56765635..56765674,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000062;6.07e-23;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,5.63e-19,11;CL:0000375,5.63e-19,11;CL:0000335,5.63e-19,11 | |||
|ontology_enrichment_development_v019=CL:0000335;5.38e-19;11!UBERON:0007123;3.42e-11;5 | |||
|ontology_enrichment_disease=DOID:3112!4.46e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:3112;5.12e-50;1!DOID:4556;6.76e-18;3!DOID:3908;2.66e-11;5!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,3.99e-50,1;DOID:4556,6.76e-18,3;DOID:3908,2.66e-11,5;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0002038!8.91e-10!1;UBERON:0009661!8.91e-10!1;UBERON:0002581!2.67e-09!1;UBERON:0002046!7.71e-08!5;UBERON:0004117!7.71e-08!5;UBERON:0007689!7.71e-08!5;UBERON:0007123!7.71e-08!5;UBERON:0003091!7.71e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001474;4.68e-12;18!UBERON:0002046;3.42e-11;5!UBERON:0004765;1.13e-08;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,3.26e-11,5;UBERON:0004117,3.26e-11,5;UBERON:0007689,3.26e-11,5;UBERON:0007123,3.26e-11,5;UBERON:0003091,3.26e-11,5 | |||
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|short_description=p@chr6:56765635..56765674,- | |||
}} | }} |
Latest revision as of 02:33, 31 July 2015
Short description: | p@chr6:56765635..56765674, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:56765635..56765674, - |
Coexpression cluster: | C391_large_bronchioalveolar_fibrosarcoma_lung_pancreatic_giant_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 5.63e-19 | 11 |
osteoprogenitor cell | 5.63e-19 | 11 |
mesenchyme condensation cell | 5.63e-19 | 11 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 3.26e-11 | 5 |
pharyngeal pouch | 3.26e-11 | 5 |
thyroid diverticulum | 3.26e-11 | 5 |
pharyngeal pouch 2 | 3.26e-11 | 5 |
thyroid primordium | 3.26e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 3.99e-50 | 1 |
lung large cell carcinoma | 6.76e-18 | 3 |
non-small cell lung carcinoma | 2.66e-11 | 5 |
lung carcinoma | 7.48e-07 | 9 |