FFCP PHASE1:Hg19::chr6:56484207..56484218,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:56484207..56484218,-
|short_description=p79@DST
|description=CAGE_peak_79_at_DST_5end
|association_with_transcript=-158bp_to_X58677_5end
|EntrezGene=667
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=667 | |EntrezGene=667 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1090 | |HGNC=1090 | ||
|TSSclassifier=strong | |||
|UniProt=Q03001 | |UniProt=Q03001 | ||
|association_with_transcript=-158bp_to_X58677_5end | |||
|cluster_id=chr6:56484207..56484218,- | |||
|coexpression_cluster_id=C457 | |||
|description=CAGE_peak_79_at_DST_5end | |||
|id=chr6:56484207..56484218,- | |||
|ontology_enrichment_celltype=CL:0002076!7.22e-15!43;CL:0000223!6.44e-12!59;CL:0000066!1.29e-11!254;CL:0002251!2.59e-11!21;CL:0002623!2.04e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002623;4.31e-25;3!CL:0002076;2.83e-24;42!CL:0000622;1.75e-15;5!CL:0002251;7.42e-15;20!CL:0000154;4.52e-13;6!CL:0002368;4.85e-13;13!CL:0000150;5.00e-09;9!CL:0002231;1.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.92e-27,42;CL:0002623,4.31e-25,3;CL:0000223,1.99e-19,58;CL:0000622,1.75e-15,5;CL:0002251,8.57e-15,20;CL:0000154,4.52e-13,6;CL:0002368,4.65e-13,13;CL:0000150,5.00e-09,9;CL:0000066,6.20e-08,253;CL:0002231,1.93e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.79e-09;58 | |||
|ontology_enrichment_disease=DOID:1749!6.95e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003729!1.44e-11!5;UBERON:0000166!7.92e-11!21;UBERON:0000161!2.17e-09!35;UBERON:0003343!2.30e-09!4;UBERON:0004785!2.30e-09!4;UBERON:0001004!2.40e-09!72;UBERON:0000165!4.02e-09!28;UBERON:0000930!4.02e-09!28;UBERON:0004119!5.34e-08!169;UBERON:0000925!5.34e-08!169;UBERON:0006595!5.34e-08!169;UBERON:0000033!1.35e-07!123;UBERON:0000153!6.21e-07!129;UBERON:0007811!6.21e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;4.52e-13;6!UBERON:0003293;4.52e-13;6!UBERON:0003294;4.52e-13;6!UBERON:0010047;4.52e-13;6!UBERON:0003408;4.52e-13;6!UBERON:0000167;4.52e-13;6!UBERON:0006562;2.72e-10;2!UBERON:0000161;2.89e-09;19!UBERON:0000166;2.89e-09;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,4.52e-13,6;UBERON:0003293,4.52e-13,6;UBERON:0003294,4.52e-13,6;UBERON:0010047,4.52e-13,6;UBERON:0000167,4.52e-13,6;UBERON:0001004,1.21e-08,74;UBERON:0000161,1.93e-08,36;UBERON:0003408,3.25e-08,10;UBERON:0000166,4.55e-08,22 | |||
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| ||
|short_description=p79@DST | |||
}} | }} |
Latest revision as of 09:04, 19 September 2015
Short description: | p79@DST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_79_at_DST_5end |
Coexpression cluster: | C457_salivary_Prostate_oral_Small_Keratinocyte_Urothelial_Mammary |
Association with transcript: | -158bp_to_X58677_5end |
EntrezGene: | DST |
HGNC: | 1090 |
UniProt: | Q03001 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.92e-27 | 42 |
acinar cell of salivary gland | 4.31e-25 | 3 |
endodermal cell | 1.99e-19 | 58 |
acinar cell | 1.75e-15 | 5 |
epithelial cell of alimentary canal | 8.57e-15 | 20 |
protein secreting cell | 4.52e-13 | 6 |
respiratory epithelial cell | 4.65e-13 | 13 |
glandular epithelial cell | 5.00e-09 | 9 |
epithelial cell | 6.20e-08 | 253 |
epithelial cell of prostate | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 4.52e-13 | 6 |
gland of oral region | 4.52e-13 | 6 |
gland of foregut | 4.52e-13 | 6 |
oral gland | 4.52e-13 | 6 |
oral cavity | 4.52e-13 | 6 |
respiratory system | 1.21e-08 | 74 |
orifice | 1.93e-08 | 36 |
gland of gut | 3.25e-08 | 10 |
oral opening | 4.55e-08 | 22 |