FFCP PHASE1:Hg19::chr6:43477816..43477847,-: Difference between revisions
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|id=chr6:43477816..43477847,-
|short_description=p6@LRRC73
|description=CAGE_peak_6_at_LRRC73_5end
|association_with_transcript=233bp_to_BC108661_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221424 | |EntrezGene=221424 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=21375 | |HGNC=21375 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JTD7 | |UniProt=Q5JTD7 | ||
|association_with_transcript=233bp_to_BC108661_5end | |||
|cluster_id=chr6:43477816..43477847,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_LRRC73_5end | |||
|id=chr6:43477816..43477847,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.60e-26!115;UBERON:0001049!3.83e-21!57;UBERON:0005068!3.83e-21!57;UBERON:0006241!3.83e-21!57;UBERON:0007135!3.83e-21!57;UBERON:0002780!6.54e-21!41;UBERON:0001890!6.54e-21!41;UBERON:0006240!6.54e-21!41;UBERON:0001893!2.09e-20!34;UBERON:0003080!2.62e-20!42;UBERON:0002616!3.11e-20!59;UBERON:0001869!2.01e-19!32;UBERON:0002791!2.12e-18!33;UBERON:0001950!5.09e-18!20;UBERON:0002020!5.36e-18!34;UBERON:0003528!5.36e-18!34;UBERON:0000955!6.30e-18!69;UBERON:0006238!6.30e-18!69;UBERON:0005743!1.41e-17!86;UBERON:0001017!2.95e-17!82;UBERON:0002619!3.29e-16!22;UBERON:0000073!2.69e-15!94;UBERON:0001016!2.69e-15!94;UBERON:0002346!4.25e-15!90;UBERON:0003075!1.03e-14!86;UBERON:0007284!1.03e-14!86;UBERON:0003056!4.81e-14!61;UBERON:0000956!5.12e-14!25;UBERON:0000203!5.12e-14!25;UBERON:0001871!7.91e-13!7;UBERON:0000033!2.15e-11!123;UBERON:0000153!1.47e-10!129;UBERON:0007811!1.47e-10!129;UBERON:0002771!2.97e-09!3;UBERON:0000924!4.28e-09!173;UBERON:0006601!4.28e-09!173;UBERON:0004121!1.04e-08!169;UBERON:0000200!3.66e-08!6;UBERON:0000369!3.31e-07!4;UBERON:0002435!3.31e-07!4;UBERON:0000204!3.31e-07!4;UBERON:0010082!3.31e-07!4;UBERON:0003135!4.82e-07!11;UBERON:0004111!6.24e-07!241;UBERON:0000025!8.48e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;4.06e-27;5!UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0000991;2.44e-07;21!UBERON:0001950;3.05e-07;20!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.55e-27,5;UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0001950,2.95e-07,20;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22 | |||
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| ||
|short_description=p6@LRRC73 | |||
}} | }} |
Latest revision as of 22:20, 18 September 2015
Short description: | p6@LRRC73 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LRRC73_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 233bp_to_BC108661_5end |
EntrezGene: | LRRC73 |
HGNC: | 21375 |
UniProt: | Q5JTD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.55e-27 | 5 |
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
neocortex | 2.95e-07 | 20 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |