FFCP PHASE1:Hg19::chr6:41040849..41040860,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:41040849..41040860,+
|short_description=p3@NFYA
|description=CAGE_peak_3_at_NFYA_5end
|association_with_transcript=-100bp_to_uc003opq.2_5end
|EntrezGene=4...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4800 | |EntrezGene=4800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7804 | |HGNC=7804 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-100bp_to_uc003opq.2_5end | |||
|cluster_id=chr6:41040849..41040860,+ | |||
|description=CAGE_peak_3_at_NFYA_5end | |||
|id=chr6:41040849..41040860,+ | |||
|ontology_enrichment_celltype=CL:0000860!3.31e-12!45;CL:0002057!6.76e-12!42;CL:0002031!6.48e-09!124;CL:0000738!1.48e-08!140;CL:0002087!9.62e-08!119;CL:0000557!8.57e-07!71;CL:0002393!8.96e-07!9;CL:0002397!8.96e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000875;1.93e-10;3!CL:0002396;1.93e-10;3!CL:0000576;6.35e-10;48!CL:0000860;8.79e-08;33!CL:0002057;8.79e-08;33!CL:0000766;1.26e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.54e-16,42;CL:0002057,3.54e-16,42;CL:0000473,1.14e-13,48;CL:0000234,1.14e-13,48;CL:0002393,6.01e-13,9;CL:0002397,6.01e-13,9;CL:0000766,6.54e-13,72;CL:0000839,6.58e-13,66;CL:0000557,1.19e-12,67;CL:0000875,2.25e-10,3;CL:0002396,2.25e-10,3;CL:0002194,3.50e-10,59;CL:0000576,3.50e-10,59;CL:0000040,3.50e-10,59;CL:0000559,3.50e-10,59;CL:0002009,9.79e-10,61;CL:0000763,4.82e-08,108;CL:0000049,4.82e-08,108;CL:0002031,1.31e-07,120;CL:0000738,6.33e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.19e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.27e-07!94;UBERON:0001016!1.27e-07!94;UBERON:0005743!6.74e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;1.64e-07;2!UBERON:0000122;1.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.02e-12,76;UBERON:0001474,9.75e-11,82;UBERON:0002405,4.42e-10,93;UBERON:0004765,2.21e-09,90;UBERON:0002390,2.52e-09,98;UBERON:0003061,2.52e-09,98;UBERON:0002193,4.99e-08,108;UBERON:0001434,5.32e-08,100;UBERON:0005162,6.50e-08,2;UBERON:0000122,6.50e-08,2 | |||
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| ||
|short_description=p3@NFYA | |||
}} | }} |
Latest revision as of 18:07, 18 September 2015
Short description: | p3@NFYA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NFYA_5end |
Coexpression cluster: | NA |
Association with transcript: | -100bp_to_uc003opq.2_5end |
EntrezGene: | NFYA |
HGNC: | 7804 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.54e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.54e-16 | 42 |
defensive cell | 1.14e-13 | 48 |
phagocyte | 1.14e-13 | 48 |
intermediate monocyte | 6.01e-13 | 9 |
CD14-positive, CD16-positive monocyte | 6.01e-13 | 9 |
myeloid leukocyte | 6.54e-13 | 72 |
myeloid lineage restricted progenitor cell | 6.58e-13 | 66 |
granulocyte monocyte progenitor cell | 1.19e-12 | 67 |
non-classical monocyte | 2.25e-10 | 3 |
CD14-low, CD16-positive monocyte | 2.25e-10 | 3 |
monopoietic cell | 3.50e-10 | 59 |
monocyte | 3.50e-10 | 59 |
monoblast | 3.50e-10 | 59 |
promonocyte | 3.50e-10 | 59 |
macrophage dendritic cell progenitor | 9.79e-10 | 61 |
myeloid cell | 4.82e-08 | 108 |
common myeloid progenitor | 4.82e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 1.31e-07 | 120 |
leukocyte | 6.33e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.02e-12 | 76 |
bone element | 9.75e-11 | 82 |
immune system | 4.42e-10 | 93 |
skeletal element | 2.21e-09 | 90 |
hematopoietic system | 2.52e-09 | 98 |
blood island | 2.52e-09 | 98 |
hemolymphoid system | 4.99e-08 | 108 |
skeletal system | 5.32e-08 | 100 |
multi cell component structure | 6.50e-08 | 2 |
neuron projection bundle | 6.50e-08 | 2 |