FFCP PHASE1:Hg19::chr6:37401026..37401037,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:37401026..37401037,+
|short_description=p3@FTSJD2
|description=CAGE_peak_3_at_FTSJD2_5end
|association_with_transcript=30bp_to_ENST00000373451,ENST00000455...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23070 | |EntrezGene=23070 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21077 | |HGNC=21077 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N1G2,Q5T7F5 | |UniProt=Q8N1G2,Q5T7F5 | ||
|association_with_transcript=30bp_to_ENST00000373451,ENST00000455891_5end | |||
|cluster_id=chr6:37401026..37401037,+ | |||
|description=CAGE_peak_3_at_FTSJD2_5end | |||
|id=chr6:37401026..37401037,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!1.27e-08!41;UBERON:0001890!1.27e-08!41;UBERON:0006240!1.27e-08!41;UBERON:0001017!3.46e-08!82;UBERON:0002020!3.69e-08!34;UBERON:0003528!3.69e-08!34;UBERON:0001869!3.94e-08!32;UBERON:0001893!4.10e-08!34;UBERON:0001049!4.68e-08!57;UBERON:0005068!4.68e-08!57;UBERON:0006241!4.68e-08!57;UBERON:0007135!4.68e-08!57;UBERON:0003080!6.92e-08!42;UBERON:0002791!9.22e-08!33;UBERON:0005743!2.36e-07!86;UBERON:0000955!3.61e-07!69;UBERON:0006238!3.61e-07!69;UBERON:0000956!3.68e-07!25;UBERON:0000203!3.68e-07!25;UBERON:0002619!5.98e-07!22;UBERON:0007023!8.25e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;2.36e-07;32!UBERON:0003528;2.57e-07;34!UBERON:0002020;2.57e-07;34!UBERON:0001893;3.00e-07;34!UBERON:0002780;3.25e-07;41!UBERON:0001890;3.25e-07;41!UBERON:0001869;3.90e-07;32!UBERON:0000956;6.73e-07;25!UBERON:0000203;6.73e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.00e-10,56;UBERON:0005068,5.00e-10,56;UBERON:0006241,5.00e-10,56;UBERON:0007135,5.00e-10,56;UBERON:0000073,7.01e-10,53;UBERON:0002616,7.01e-10,53;UBERON:0001017,1.02e-09,81;UBERON:0002780,1.12e-09,41;UBERON:0001890,1.12e-09,41;UBERON:0003080,1.12e-09,41;UBERON:0006240,1.12e-09,41;UBERON:0001016,5.96e-09,89;UBERON:0000955,9.22e-09,68;UBERON:0006238,9.22e-09,68;UBERON:0003528,1.09e-08,34;UBERON:0002020,1.09e-08,34;UBERON:0001893,1.23e-08,34;UBERON:0001869,1.25e-08,32;UBERON:0002791,2.86e-08,32;UBERON:0007023,1.74e-07,114;UBERON:0000956,2.41e-07,25;UBERON:0000203,2.41e-07,25;UBERON:0002619,2.55e-07,22;UBERON:0001950,5.69e-07,20 | |||
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| ||
|short_description=p3@FTSJD2 | |||
}} | }} |
Latest revision as of 14:47, 18 September 2015
Short description: | p3@FTSJD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FTSJD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000373451, ENST00000455891_5end |
EntrezGene: | FTSJD2 |
HGNC: | 21077 |
UniProt: | Q8N1G2Q5T7F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 5.00e-10 | 56 |
neural rod | 5.00e-10 | 56 |
future spinal cord | 5.00e-10 | 56 |
neural keel | 5.00e-10 | 56 |
regional part of nervous system | 7.01e-10 | 53 |
regional part of brain | 7.01e-10 | 53 |
central nervous system | 1.02e-09 | 81 |
regional part of forebrain | 1.12e-09 | 41 |
forebrain | 1.12e-09 | 41 |
anterior neural tube | 1.12e-09 | 41 |
future forebrain | 1.12e-09 | 41 |
nervous system | 5.96e-09 | 89 |
brain | 9.22e-09 | 68 |
future brain | 9.22e-09 | 68 |
brain grey matter | 1.09e-08 | 34 |
gray matter | 1.09e-08 | 34 |
telencephalon | 1.23e-08 | 34 |
cerebral hemisphere | 1.25e-08 | 32 |
regional part of telencephalon | 2.86e-08 | 32 |
adult organism | 1.74e-07 | 114 |
cerebral cortex | 2.41e-07 | 25 |
pallium | 2.41e-07 | 25 |
regional part of cerebral cortex | 2.55e-07 | 22 |
neocortex | 5.69e-07 | 20 |