FFCP PHASE1:Hg19::chr6:32821442..32821538,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:32821442..32821538,-
|short_description=p1@TAP1
|description=CAGE_peak_1_at_TAP1_5end
|association_with_transcript=-29bp_to_AB012644,L21204,L21205,L21206,L...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6890 | |EntrezGene=6890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=43 | |HGNC=43 | ||
|TSSclassifier=strong | |||
|UniProt=O94774,Q03518 | |UniProt=O94774,Q03518 | ||
|association_with_transcript=-29bp_to_AB012644,L21204,L21205,L21206,L21207,L21208_5end | |||
|cluster_id=chr6:32821442..32821538,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_1_at_TAP1_5end | |||
|id=chr6:32821442..32821538,- | |||
|ontology_enrichment_celltype=CL:0000738!1.99e-33!140;CL:0002087!2.21e-31!119;CL:0002031!7.76e-27!124;CL:0000988!2.66e-17!182;CL:0000037!1.14e-15!172;CL:0000566!1.14e-15!172;CL:0002009!1.48e-15!65;CL:0000838!1.65e-15!52;CL:0000766!2.01e-15!76;CL:0000542!2.08e-15!53;CL:0000051!2.08e-15!53;CL:0002032!3.16e-15!165;CL:0000837!3.16e-15!165;CL:0002194!5.36e-15!63;CL:0000576!5.36e-15!63;CL:0000040!5.36e-15!63;CL:0000559!5.36e-15!63;CL:0002057!9.02e-15!42;CL:0000860!6.23e-14!45;CL:0000557!1.20e-13!71;CL:0000839!2.24e-11!70;CL:0000084!1.52e-08!25;CL:0000827!1.52e-08!25;CL:0000003!3.19e-08!722;CL:0000791!5.38e-08!18;CL:0000789!5.38e-08!18;CL:0002420!5.38e-08!18;CL:0002419!5.38e-08!18;CL:0000790!5.38e-08!18;CL:0000134!1.72e-07!358;CL:0002371!1.85e-07!591;CL:0002320!3.13e-07!365;CL:0000945!3.81e-07!24;CL:0000826!3.81e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.51e-12;33!CL:0002057;2.51e-12;33!CL:0000473;5.13e-11;39!CL:0000234;5.13e-11;39!CL:0002087;6.09e-10;104!CL:0000576;8.16e-10;48!CL:0000542;2.91e-09;53!CL:0000084;1.37e-08;25!CL:0000791;5.69e-08;18!CL:0000789;5.69e-08;18!CL:0002419;5.69e-08;18!CL:0000738;8.81e-08;136!CL:0000945;3.53e-07;24!CL:0000766;7.34e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.18e-34,136;CL:0002087,3.62e-32,115;CL:0002031,1.84e-27,120;CL:0000988,2.44e-17,177;CL:0002009,2.63e-16,61;CL:0000766,4.88e-16,72;CL:0000037,7.66e-16,168;CL:0002194,9.63e-16,59;CL:0000576,9.63e-16,59;CL:0000040,9.63e-16,59;CL:0000559,9.63e-16,59;CL:0000838,1.64e-15,52;CL:0000473,1.89e-15,48;CL:0000234,1.89e-15,48;CL:0000542,2.08e-15,53;CL:0000051,2.08e-15,53;CL:0002032,2.09e-15,161;CL:0000837,2.09e-15,161;CL:0000860,9.01e-15,42;CL:0002057,9.01e-15,42;CL:0000557,3.19e-14,67;CL:0000839,7.55e-12,66;CL:0000084,1.52e-08,25;CL:0000827,1.52e-08,25;CL:0000791,5.38e-08,18;CL:0000789,5.38e-08,18;CL:0002420,5.38e-08,18;CL:0002419,5.38e-08,18;CL:0000790,5.38e-08,18;CL:0000134,2.09e-07,354;CL:0002320,3.79e-07,361;CL:0000945,3.81e-07,24;CL:0000826,3.81e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;7.14e-11;42!CL:0000051;2.91e-09;53!CL:0000790;5.69e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.02e-23!112;UBERON:0002390!1.41e-21!102;UBERON:0003061!1.41e-21!102;UBERON:0003081!4.61e-14!216;UBERON:0002405!1.80e-12!115;UBERON:0002371!2.12e-12!80;UBERON:0001474!7.74e-10!86;UBERON:0000178!2.79e-09!15;UBERON:0000179!2.79e-09!15;UBERON:0000463!2.79e-09!15;UBERON:0004765!4.30e-08!101;UBERON:0001434!4.30e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.63e-09;15!UBERON:0000179;2.63e-09;15!UBERON:0000463;2.63e-09;15!UBERON:0002390;2.48e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.26e-23,108;UBERON:0002390,3.31e-22,98;UBERON:0003061,3.31e-22,98;UBERON:0002405,1.52e-16,93;UBERON:0003081,3.32e-13,203;UBERON:0002371,7.61e-13,76;UBERON:0001474,3.83e-10,82;UBERON:0004765,2.77e-09,90;UBERON:0000178,2.79e-09,15;UBERON:0000179,2.79e-09,15;UBERON:0000463,2.79e-09,15;UBERON:0001434,6.61e-08,100 | |||
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| ||
|short_description=p1@TAP1 | |||
}} | }} |
Latest revision as of 04:17, 18 September 2015
Short description: | p1@TAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TAP1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -29bp_to_AB012644, L21204, L21205, L21206, L21207, L21208_5end |
EntrezGene: | TAP1 |
HGNC: | 43 |
UniProt: | O94774Q03518 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.26e-23 | 108 |
hematopoietic system | 3.31e-22 | 98 |
blood island | 3.31e-22 | 98 |
immune system | 1.52e-16 | 93 |
lateral plate mesoderm | 3.32e-13 | 203 |
bone marrow | 7.61e-13 | 76 |
bone element | 3.83e-10 | 82 |
skeletal element | 2.77e-09 | 90 |
blood | 2.79e-09 | 15 |
haemolymphatic fluid | 2.79e-09 | 15 |
organism substance | 2.79e-09 | 15 |
skeletal system | 6.61e-08 | 100 |