FFCP PHASE1:Hg19::chr6:32805986..32806000,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:32805986..32806000,-
|short_description=p6@TAP2
|description=CAGE_peak_6_at_TAP2_5end
|association_with_transcript=9bp_to_AB073779,BT009906,FM246456_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6891 | |EntrezGene=6891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=44 | |HGNC=44 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PT8,Q5JNW1,B6VNV2 | |UniProt=Q96PT8,Q5JNW1,B6VNV2 | ||
|association_with_transcript=9bp_to_AB073779,BT009906,FM246456_5end | |||
|cluster_id=chr6:32805986..32806000,- | |||
|description=CAGE_peak_6_at_TAP2_5end | |||
|id=chr6:32805986..32806000,- | |||
|ontology_enrichment_celltype=CL:0000063!1.02e-10!578;CL:0000548!1.82e-10!679;CL:0000004!1.82e-10!679;CL:0000255!1.82e-10!679;CL:0000066!3.25e-10!254;CL:0000012!3.51e-10!682;CL:0000076!4.49e-10!62 | |||
|ontology_enrichment_celltype_v019=CL:0002202;1.98e-08;9!CL:0002632;1.98e-08;9!CL:0002368;2.87e-07;13!CL:0002577;6.10e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,1.08e-10,63;CL:0002202,1.27e-08,9;CL:0002632,1.27e-08,9;CL:0000066,7.63e-08,253;CL:0002368,2.02e-07,13;CL:0002577,6.08e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!8.36e-10!239;DOID:162!6.63e-09!235;DOID:2531!1.16e-07!51;DOID:0060083!1.16e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;6.83e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.14e-07,14;UBERON:0000158,1.14e-07,14;UBERON:0003124,4.67e-07,7;UBERON:0000478,5.80e-07,24 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,0,0,0,0,0,0,1.72013755551056,1.39560233594486,2.83973783769224,2.63766978228454,0,0,0,0.602694528023977,0,0,0.492484232307152,1.02000345622126,0,0,0.136874425072884,0.125542639594803,0.152826811495903,0.492603536699674,0.236132343941038,0,0.383829398097213,0.154816123316076,1.83884244895785,2.409647350226,1.47901604066715,1.47187681102573,1.56386155736164,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0.575384784644301,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0.659702600373432,0.398927315243264,0,0,0,0,0.251248665256743,0,0.434377689410233,0,0,0,0,0.425208599930087,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0,0,0,0,0,0.328875809207352,0,0,0,0,0,0,0.766440987203842,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,0,0.144846518960824,0.795285947051099,0,0.189069634328136,0.443458794925128,0.263504357079378,0.327447688744282,2.18577172975525,2.59549109949101,0,0.174129737299267,0.26591592103773,0,0,0,0.993812036833525,0,0.347140501607594,1.13061588384802,1.25849830862972,1.10047216776027,1.46296476575767,0.258416759169329,0,0,0.402829317109147,0,0,1.47065232138347,0.81014194788176,0.625098097988558,1.57170560838319,0.900891843866578,1.53316637465883,2.84779697870439,0.183201743930407,0,0,0,0,0.633152558322899,0.264818361626438,1.14734648299525,1.06400514659507,0,1.06748995729705,0.98667019366864,0,0.67355336034844,0.817309515567294,0.302714855289863,0.576175924479999,1.87457145467037,0.936480230490962,0.570471821544449,0.448346041655403,0.822041490506354,1.13311061057692,0.842704840213491,0.204154171254893,0.859840221182376,0.619954687054593,0,0.247266929278557,2.73048408581408,1.43723628363248,0.841680569770331,0.250237039743928,0.277064115484183,0,0.30648779579902,0.150238058906597,0.340296549480063,1.07633781413317,0,0.211931901159562,1.20036438433761,0.92747276314595,0.257640540045629,0.18611685633159,0.506328996723799,0.292311015483596,0.504867548488229,0.184099797284599,0.161646056818812,0,0.503760491138201,0.67824236924195,0.773043412653187,1.09098448236334,2.58124135850103,0,0.397589304964456,0,0.414644220061482,0.504641701751257,0,1.56449532329816,0,0,0.464367928031979,0,0.946454400318751,0.842923450390509,0.723033089650446,0.110293972732394,0.435758888184812,0.474541238222193,0.539325232640658,0.98110732562673,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,2.08525542276389,2.24803506515239,1.50793458617446,0.0925884451585296,0.325808305310325,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0.468008530278475,0.445893486866185,1.87467667973554,0.16798212819886,0.992425680696705,2.86587272649115,0.581267877027924,1.91691339582606,0.492663237895943,0.088048434013226,0,0,0.12624243342638,0.126995788584338,0,1.17217447210047,1.71072446022705,0.308482478109971,0.600686115687835,0.285826432630578,1.00917975910825,1.30788020649984,0.80672114403045,0,0,0.845302752556,0,0,0.514414748524284,0,0.799266537048298,0,0,0,1.30294473717494,0,0.791951872933429,0.301439377059586,0.871533458600294,0.399891964728228,0,0,0,0.479249710983165,0,0,0.289562613335158,0.410952645100767,0.716243852959582,0.560425719967636,0,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0,0,0,0.542530047399471,0.207970861530807,0,0.473107245101804,0.35142424497814,0,0,1.03473071292505,0.664225598535437,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0,10.0032098577266,6.65741758041988,6.65258645325297,0.248107807818777,0.460385919864187,0.280660094433074,0.128139149255701,0,0,0,0.308419387605311,0.710246901252508,1.14978018419333,0,1.39452454151951,0,0.40101294060657,0.644566922551274,1.03333003348146,1.63882051206045,0,0,0.0770153371044148,0.784349769176855,0,0.211103257785751,1.13733384070897,0.340187410553031,0.647747748306418,0,0,0,1.01950509218015,0.831076008928724,0.223874754722178,0,0,0.512900250232778,0,0,0.206082023295445,1.00726411300178,1.81520899825294,1.14853107599234,0,0,1.06337790121334,0.770243085573222,0.921022048356777,0.689182862422653,0.644521469209642,0.145016693914229,1.02271952899321,0.0890320356467374,0.991709492165869,0.192190067365106,3.57315594984836,0.30347334256665,0,0,0,0.616067160352178,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0.202182481573316,0,0.421258456238981,1.46290121726877,1.21856744815642,0,0.136499911407986,0,0,1.65409603063837,0,0.438450885253763,0,0,0.202910376962704,0,0.563391205064483,0.143411352204052,0.196498082026242,0,0,0,0,0.379473173765715,0.699869440489966,1.05844323998063,0,6.53345909167936,0,0,0,0.886860307073351,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0.854592569019785,0,1.71528151186722,0.185803175125719,0.577076851905779,0.142283686696828,0.637705090915289,2.79411120005943,0,0.423347165447766,0.324621940274555,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| ||
|short_description=p6@TAP2 | |||
}} | }} |
Latest revision as of 04:00, 18 September 2015
Short description: | p6@TAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TAP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_AB073779, BT009906, FM246456_5end |
EntrezGene: | TAP2 |
HGNC: | 44 |
UniProt: | Q96PT8Q5JNW1B6VNV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 1.08e-10 | 63 |
epithelial cell of tracheobronchial tree | 1.27e-08 | 9 |
epithelial cell of lower respiratory tract | 1.27e-08 | 9 |
epithelial cell | 7.63e-08 | 253 |
respiratory epithelial cell | 2.02e-07 | 13 |
placental epithelial cell | 6.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.14e-07 | 14 |
membranous layer | 1.14e-07 | 14 |
chorion | 4.67e-07 | 7 |
extraembryonic structure | 5.80e-07 | 24 |