FFCP PHASE1:Hg19::chr6:32144838..32144908,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:32144838..32144908,-
|short_description=p2@AGPAT1
|description=CAGE_peak_2_at_AGPAT1_5end
|association_with_transcript=0bp_to_ENST00000395499_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10554 | |EntrezGene=10554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=324 | |HGNC=324 | ||
|TSSclassifier=strong | |||
|UniProt=Q99943 | |UniProt=Q99943 | ||
|association_with_transcript=0bp_to_ENST00000395499_5end | |||
|cluster_id=chr6:32144838..32144908,- | |||
|description=CAGE_peak_2_at_AGPAT1_5end | |||
|id=chr6:32144838..32144908,- | |||
|ontology_enrichment_celltype=CL:0002321!1.05e-09!248;CL:0000220!4.01e-09!246;CL:0000066!4.15e-08!254;CL:0000055!4.28e-08!180;CL:0000680!4.66e-08!57;CL:0000056!4.66e-08!57;CL:0000355!4.66e-08!57;CL:0000187!1.34e-07!54;CL:0000183!1.49e-07!59;CL:0000192!2.65e-07!42;CL:0000514!2.65e-07!42;CL:0000393!4.29e-07!60;CL:0000211!4.29e-07!60 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.53e-08,250;CL:0000680,3.66e-07,58;CL:0000056,3.66e-07,58;CL:0000355,3.66e-07,58;CL:0000192,5.94e-07,43;CL:0000514,5.94e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!9.72e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.73e-13!347;UBERON:0003104!1.23e-12!238;UBERON:0009142!1.23e-12!238;UBERON:0002100!3.51e-12!216;UBERON:0000475!1.29e-10!365;UBERON:0000468!2.99e-10!659;UBERON:0005256!6.69e-10!143;UBERON:0004119!8.64e-10!169;UBERON:0000925!8.64e-10!169;UBERON:0006595!8.64e-10!169;UBERON:0004458!1.81e-09!49;UBERON:0000486!2.85e-09!82;UBERON:0002323!1.26e-08!46;UBERON:0002385!1.28e-08!63;UBERON:0001015!1.28e-08!63;UBERON:0000383!1.28e-08!63;UBERON:0001048!1.42e-08!168;UBERON:0005156!3.73e-08!59;UBERON:0000990!3.73e-08!59;UBERON:0000466!5.45e-08!126;UBERON:0001134!6.85e-08!61;UBERON:0002036!6.85e-08!61;UBERON:0003082!6.85e-08!61;UBERON:0001007!8.80e-08!155;UBERON:0001555!8.80e-08!155;UBERON:0007026!8.80e-08!155;UBERON:0000922!1.42e-07!612;UBERON:0000914!5.42e-07!83;UBERON:0002329!5.42e-07!83;UBERON:0003077!5.42e-07!83;UBERON:0003059!5.42e-07!83;UBERON:0007282!5.42e-07!83;UBERON:0009618!5.42e-07!83;UBERON:0007285!5.42e-07!83;UBERON:0000464!6.08e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0004458;7.59e-07;48!UBERON:0003101;8.11e-07;22!UBERON:0000079;8.11e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004458,1.22e-09,49;UBERON:0002100,1.92e-09,199;UBERON:0003104,2.91e-09,160;UBERON:0009142,2.91e-09,160;UBERON:0002323,1.03e-08,46;UBERON:0005156,1.50e-08,59;UBERON:0000990,1.50e-08,59;UBERON:0005256,1.65e-08,122;UBERON:0000486,2.34e-08,83;UBERON:0002385,1.02e-07,64;UBERON:0001015,1.02e-07,64;UBERON:0000383,1.02e-07,64;UBERON:0003101,5.58e-07,22;UBERON:0000079,5.58e-07,22;UBERON:0001134,5.66e-07,62;UBERON:0002036,5.66e-07,62;UBERON:0003082,5.66e-07,62 | |||
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| ||
|short_description=p2@AGPAT1 | |||
}} | }} |
Latest revision as of 01:55, 18 September 2015
Short description: | p2@AGPAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AGPAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000395499_5end |
EntrezGene: | AGPAT1 |
HGNC: | 324 |
UniProt: | Q99943 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.53e-08 | 250 |
muscle precursor cell | 3.66e-07 | 58 |
myoblast | 3.66e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.66e-07 | 58 |
smooth muscle cell | 5.94e-07 | 43 |
smooth muscle myoblast | 5.94e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
body cavity or lining | 1.22e-09 | 49 |
trunk | 1.92e-09 | 199 |
mesenchyme | 2.91e-09 | 160 |
entire embryonic mesenchyme | 2.91e-09 | 160 |
body cavity | 1.03e-08 | 46 |
reproductive structure | 1.50e-08 | 59 |
reproductive system | 1.50e-08 | 59 |
trunk mesenchyme | 1.65e-08 | 122 |
multilaminar epithelium | 2.34e-08 | 83 |
muscle tissue | 1.02e-07 | 64 |
musculature | 1.02e-07 | 64 |
musculature of body | 1.02e-07 | 64 |
male organism | 5.58e-07 | 22 |
male reproductive system | 5.58e-07 | 22 |
skeletal muscle tissue | 5.66e-07 | 62 |
striated muscle tissue | 5.66e-07 | 62 |
myotome | 5.66e-07 | 62 |