FFCP PHASE1:Hg19::chr6:2971470..2971484,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:2971470..2971484,-
|short_description=p11@SERPINB6
|description=CAGE_peak_11_at_SERPINB6_5end
|association_with_transcript=-30bp_to_ENST00000380529_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5269 | |EntrezGene=5269 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8950 | |HGNC=8950 | ||
|TSSclassifier=strong | |||
|UniProt=P35237 | |UniProt=P35237 | ||
|association_with_transcript=-30bp_to_ENST00000380529_5end | |||
|cluster_id=chr6:2971470..2971484,- | |||
|description=CAGE_peak_11_at_SERPINB6_5end | |||
|id=chr6:2971470..2971484,- | |||
|ontology_enrichment_celltype=CL:0002057!2.23e-14!42;CL:0000860!3.27e-13!45;CL:0000557!2.85e-12!71;CL:0000839!2.91e-11!70;CL:0002194!4.40e-11!63;CL:0000576!4.40e-11!63;CL:0000040!4.40e-11!63;CL:0000559!4.40e-11!63;CL:0000766!1.28e-10!76;CL:0002009!2.03e-10!65;CL:0000222!6.78e-08!119;CL:0000763!4.54e-07!112;CL:0000049!4.54e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.78e-13;33!CL:0002057;1.78e-13;33!CL:0000473;8.39e-13;39!CL:0000234;8.39e-13;39!CL:0000576;4.17e-10;48!CL:0000766;5.61e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.65e-19,48;CL:0000234,1.65e-19,48;CL:0000860,3.27e-19,42;CL:0002057,3.27e-19,42;CL:0000557,4.66e-16,67;CL:0002194,1.81e-15,59;CL:0000576,1.81e-15,59;CL:0000040,1.81e-15,59;CL:0000559,1.81e-15,59;CL:0000839,3.70e-15,66;CL:0002009,1.27e-14,61;CL:0000766,6.18e-14,72;CL:0000763,5.57e-09,108;CL:0000049,5.57e-09,108 | |||
|ontology_enrichment_development_v019=CL:0002057;4.00e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.16e-21!216;UBERON:0004872!6.80e-13!84;UBERON:0002204!2.15e-12!167;UBERON:0001981!2.92e-12!60;UBERON:0007500!2.92e-12!60;UBERON:0004537!2.92e-12!60;UBERON:0006965!2.92e-12!60;UBERON:0001009!3.41e-12!113;UBERON:0002371!3.60e-12!80;UBERON:0000055!5.99e-12!69;UBERON:0000926!7.06e-12!448;UBERON:0004120!7.06e-12!448;UBERON:0006603!7.06e-12!448;UBERON:0004535!7.95e-12!110;UBERON:0000467!3.08e-11!625;UBERON:0002193!4.68e-11!112;UBERON:0000480!5.38e-11!626;UBERON:0002390!3.23e-10!102;UBERON:0003061!3.23e-10!102;UBERON:0001474!3.28e-10!86;UBERON:0002049!4.75e-10!79;UBERON:0007798!4.75e-10!79;UBERON:0004765!1.15e-09!101;UBERON:0001434!1.15e-09!101;UBERON:0002050!1.76e-09!605;UBERON:0005423!1.76e-09!605;UBERON:0000923!1.84e-09!604;UBERON:0005291!1.84e-09!604;UBERON:0006598!1.84e-09!604;UBERON:0002532!1.84e-09!604;UBERON:0000025!3.31e-09!194;UBERON:0003914!3.56e-09!118;UBERON:0000922!6.33e-09!612;UBERON:0000468!9.46e-09!659;UBERON:0002405!1.27e-08!115;UBERON:0000477!1.89e-08!286;UBERON:0004111!1.97e-08!241;UBERON:0001637!7.49e-08!42;UBERON:0003509!7.49e-08!42;UBERON:0004572!7.49e-08!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.26e-22,203;UBERON:0002371,1.65e-15,76;UBERON:0002405,5.50e-14,93;UBERON:0001474,1.70e-13,82;UBERON:0000926,3.73e-12,315;UBERON:0004120,3.73e-12,315;UBERON:0006603,3.73e-12,315;UBERON:0002204,4.50e-12,167;UBERON:0007500,4.68e-12,59;UBERON:0001981,4.68e-12,59;UBERON:0004537,4.68e-12,59;UBERON:0006965,4.68e-12,59;UBERON:0000055,6.28e-12,68;UBERON:0002193,9.00e-12,108;UBERON:0004765,2.87e-11,90;UBERON:0004872,3.21e-11,83;UBERON:0002390,6.60e-11,98;UBERON:0003061,6.60e-11,98;UBERON:0001434,2.02e-10,100;UBERON:0002049,3.70e-09,78;UBERON:0007798,3.70e-09,78;UBERON:0003914,6.44e-09,117;UBERON:0001009,1.37e-08,112;UBERON:0004535,1.94e-08,109;UBERON:0001637,3.19e-07,42;UBERON:0003509,3.19e-07,42;UBERON:0004572,3.19e-07,42 | |||
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| ||
|short_description=p11@SERPINB6 | |||
}} | }} |
Latest revision as of 14:31, 17 September 2015
Short description: | p11@SERPINB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SERPINB6_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000380529_5end |
EntrezGene: | SERPINB6 |
HGNC: | 8950 |
UniProt: | P35237 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.65e-19 | 48 |
phagocyte | 1.65e-19 | 48 |
classical monocyte | 3.27e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.27e-19 | 42 |
granulocyte monocyte progenitor cell | 4.66e-16 | 67 |
monopoietic cell | 1.81e-15 | 59 |
monocyte | 1.81e-15 | 59 |
monoblast | 1.81e-15 | 59 |
promonocyte | 1.81e-15 | 59 |
myeloid lineage restricted progenitor cell | 3.70e-15 | 66 |
macrophage dendritic cell progenitor | 1.27e-14 | 61 |
myeloid leukocyte | 6.18e-14 | 72 |
myeloid cell | 5.57e-09 | 108 |
common myeloid progenitor | 5.57e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.26e-22 | 203 |
bone marrow | 1.65e-15 | 76 |
immune system | 5.50e-14 | 93 |
bone element | 1.70e-13 | 82 |
mesoderm | 3.73e-12 | 315 |
mesoderm-derived structure | 3.73e-12 | 315 |
presumptive mesoderm | 3.73e-12 | 315 |
musculoskeletal system | 4.50e-12 | 167 |
epithelial tube open at both ends | 4.68e-12 | 59 |
blood vessel | 4.68e-12 | 59 |
blood vasculature | 4.68e-12 | 59 |
vascular cord | 4.68e-12 | 59 |
vessel | 6.28e-12 | 68 |
hemolymphoid system | 9.00e-12 | 108 |
skeletal element | 2.87e-11 | 90 |
splanchnic layer of lateral plate mesoderm | 3.21e-11 | 83 |
hematopoietic system | 6.60e-11 | 98 |
blood island | 6.60e-11 | 98 |
skeletal system | 2.02e-10 | 100 |
vasculature | 3.70e-09 | 78 |
vascular system | 3.70e-09 | 78 |
epithelial tube | 6.44e-09 | 117 |
circulatory system | 1.37e-08 | 112 |
cardiovascular system | 1.94e-08 | 109 |
artery | 3.19e-07 | 42 |
arterial blood vessel | 3.19e-07 | 42 |
arterial system | 3.19e-07 | 42 |