FFCP PHASE1:Hg19::chr6:23049576..23049579,-: Difference between revisions
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|id=chr6:23049576..23049579,-
|short_description=p@chr6:23049576..23049579,-
|description=CAGE_peak_at_chr6:23049576..23049579,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:23049576..23049579,- | |||
|description=CAGE_peak_at_chr6:23049576..23049579,- | |||
|id=chr6:23049576..23049579,- | |||
|ontology_enrichment_celltype=CL:0002178!2.59e-07!3;CL:0000039!4.65e-07!7;CL:0000586!4.65e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.30e-26;2!CL:0000322;8.69e-18;3!CL:0000333;3.10e-11;5!CL:0002202;8.14e-07;9!CL:0002632;8.14e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.12e-17,3;CL:0000047,1.59e-07,8;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!8.39e-08!22;DOID:2994!8.39e-08!22;DOID:0050687!3.41e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:4960;3.10e-50;1!DOID:0070004;3.10e-50;1!DOID:3910;6.30e-26;2!DOID:3908;3.10e-11;5!DOID:169;1.38e-09;6!DOID:1325;2.11e-08;7!DOID:3904;2.11e-08;7!DOID:3905;8.14e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,3.99e-50,1;DOID:0070004,3.99e-50,1;DOID:3910,9.18e-26,2;DOID:3908,3.60e-11,5;DOID:169,1.22e-09,6;DOID:1325,2.35e-08,7;DOID:3904,2.35e-08,7;DOID:3905,8.85e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0003101!1.92e-07!22;UBERON:0000079!1.92e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;6.30e-26;2!UBERON:0002173;6.30e-26;2!UBERON:0002186;6.30e-26;2!UBERON:0004821;8.69e-18;3!UBERON:0007499;8.69e-18;3!UBERON:0003215;8.69e-18;3!UBERON:0010368;8.69e-18;3!UBERON:0009911;8.69e-18;3!UBERON:0002299;8.69e-18;3!UBERON:0006524;8.69e-18;3!UBERON:0008874;8.69e-18;3!UBERON:0002169;8.69e-18;3!UBERON:0004894;8.69e-18;3!UBERON:0009856;1.06e-13;4!UBERON:0000013;3.10e-11;5!UBERON:0002410;3.10e-11;5!UBERON:0000010;8.14e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,9.18e-26,2;UBERON:0002173,9.18e-26,2;UBERON:0002186,9.18e-26,2;UBERON:0004821,1.12e-17,3;UBERON:0003215,1.12e-17,3;UBERON:0010368,1.12e-17,3;UBERON:0009911,1.12e-17,3;UBERON:0002299,1.12e-17,3;UBERON:0006524,1.12e-17,3;UBERON:0008874,1.12e-17,3;UBERON:0002169,1.12e-17,3;UBERON:0004894,1.12e-17,3;UBERON:0000013,2.66e-11,5;UBERON:0002410,2.66e-11,5;UBERON:0000010,7.48e-07,8 | |||
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|short_description=p@chr6:23049576..23049579,- | |||
}} | }} |
Latest revision as of 22:42, 30 July 2015
Short description: | p@chr6:23049576..23049579, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:23049576..23049579, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.12e-17 | 3 |
neuronal stem cell | 1.59e-07 | 8 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 9.18e-26 | 2 |
alveolar duct | 9.18e-26 | 2 |
bronchiole | 9.18e-26 | 2 |
pulmonary alveolus epithelium | 1.12e-17 | 3 |
alveolus | 1.12e-17 | 3 |
pulmonary lobule | 1.12e-17 | 3 |
lobule | 1.12e-17 | 3 |
alveolus of lung | 1.12e-17 | 3 |
alveolar system | 1.12e-17 | 3 |
pulmonary acinus | 1.12e-17 | 3 |
alveolar sac | 1.12e-17 | 3 |
alveolar wall | 1.12e-17 | 3 |
sympathetic nervous system | 2.66e-11 | 5 |
autonomic nervous system | 2.66e-11 | 5 |
peripheral nervous system | 7.48e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 3.99e-50 | 1 |
myeloma | 3.99e-50 | 1 |
lung adenocarcinoma | 9.18e-26 | 2 |
non-small cell lung carcinoma | 3.60e-11 | 5 |
neuroendocrine tumor | 1.22e-09 | 6 |
bronchus cancer | 2.35e-08 | 7 |
bronchogenic carcinoma | 2.35e-08 | 7 |
lung carcinoma | 8.85e-07 | 9 |