FFCP PHASE1:Hg19::chr10:134973494..134973510,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=85442 | |EntrezGene=85442 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=29374 | |HGNC=29374 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q76NI1 | |UniProt=Q76NI1 | ||
|association_with_transcript=-440bp_to_ENST00000304613_5end | |association_with_transcript=-440bp_to_ENST00000304613_5end | ||
|cluster_id=chr10:134973494..134973510,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_3_at_KNDC1_5end | |description=CAGE_peak_3_at_KNDC1_5end |
Latest revision as of 04:40, 17 September 2015
Short description: | p3@KNDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KNDC1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -440bp_to_ENST00000304613_5end |
EntrezGene: | KNDC1 |
HGNC: | 29374 |
UniProt: | Q76NI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@KNDC1 |
---|
0.0
1.0
2.0
3.0
4.0
5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 1.15e-07 | 1 |
Showing 1 to 1 of 1 entries
Ontology term | p-value | n |
---|---|---|
neural tube | 4.68e-54 | 56 |
neural rod | 4.68e-54 | 56 |
future spinal cord | 4.68e-54 | 56 |
neural keel | 4.68e-54 | 56 |
regional part of nervous system | 4.02e-52 | 53 |
regional part of brain | 4.02e-52 | 53 |
neocortex | 4.16e-48 | 20 |
brain | 2.22e-47 | 68 |
future brain | 2.22e-47 | 68 |
regional part of cerebral cortex | 1.04e-43 | 22 |
Showing 1 to 10 of 62 entries
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.22e-07 | 1 |
mucinous cystadenocarcinoma | 1.22e-07 | 1 |
Showing 1 to 2 of 2 entries