FFCP PHASE1:Hg19::chr6:160102300..160102326,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:160102300..160102326,-
|short_description=p5@BC041951
|description=CAGE_peak_5_at_BC041951_5end
|association_with_transcript=-7bp_to_BC041951_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_BC041951_5end | |||
|cluster_id=chr6:160102300..160102326,- | |||
|coexpression_cluster_id=C954 | |||
|description=CAGE_peak_5_at_BC041951_5end | |||
|id=chr6:160102300..160102326,- | |||
|ontology_enrichment_celltype=CL:0000766!6.54e-23!76;CL:0002194!2.53e-21!63;CL:0000576!2.53e-21!63;CL:0000040!2.53e-21!63;CL:0000559!2.53e-21!63;CL:0002057!3.74e-21!42;CL:0002009!3.85e-20!65;CL:0000860!8.88e-20!45;CL:0000839!1.65e-17!70;CL:0000557!4.95e-17!71;CL:0000763!1.61e-11!112;CL:0000049!1.61e-11!112;CL:0000738!8.75e-08!140;CL:0002087!1.44e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.32e-52;33!CL:0002057;2.32e-52;33!CL:0000473;1.50e-41;39!CL:0000234;1.50e-41;39!CL:0000576;1.93e-29;48!CL:0000766;3.78e-22;69!CL:0000763;9.34e-12;100!CL:0000771;9.86e-09;2!CL:0000094;6.92e-08;8!CL:0002087;5.40e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.07e-54,48;CL:0000234,8.07e-54,48;CL:0000860,2.16e-53,42;CL:0002057,2.16e-53,42;CL:0000766,1.29e-44,72;CL:0002194,1.36e-41,59;CL:0000576,1.36e-41,59;CL:0000040,1.36e-41,59;CL:0000559,1.36e-41,59;CL:0002009,5.16e-40,61;CL:0000839,1.75e-36,66;CL:0000557,7.69e-36,67;CL:0000763,3.48e-27,108;CL:0000049,3.48e-27,108;CL:0000738,5.50e-20,136;CL:0002087,4.74e-18,115;CL:0002031,5.13e-17,120;CL:0002032,1.11e-15,161;CL:0000837,1.11e-15,161;CL:0000037,1.04e-14,168;CL:0000988,1.43e-13,177;CL:0000771,8.18e-09,2;CL:0000094,5.80e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;6.26e-40;42!CL:0000049;3.67e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.47e-16!112;UBERON:0002390!1.13e-15!102;UBERON:0003061!1.13e-15!102;UBERON:0002371!3.92e-15!80;UBERON:0002405!4.97e-15!115;UBERON:0001474!1.29e-13!86;UBERON:0004765!3.40e-12!101;UBERON:0001434!3.40e-12!101;UBERON:0007023!4.75e-09!115;UBERON:0002204!4.29e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;1.48e-11;3!UBERON:0002081;1.83e-08;2!UBERON:0002133;1.83e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.37e-31,76;UBERON:0001474,4.69e-28,82;UBERON:0002405,6.99e-28,93;UBERON:0004765,5.88e-25,90;UBERON:0001434,1.34e-23,100;UBERON:0002193,5.33e-23,108;UBERON:0002390,2.31e-22,98;UBERON:0003061,2.31e-22,98;UBERON:0002204,5.78e-16,167;UBERON:0003081,1.06e-13,203;UBERON:0004151,1.46e-11,3;UBERON:0002081,1.67e-08,2;UBERON:0010227,1.67e-08,2;UBERON:0002133,2.61e-08,2;UBERON:0000926,6.70e-08,315;UBERON:0004120,6.70e-08,315;UBERON:0006603,6.70e-08,315 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,2.6893005858071,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0.767658796194425,0.154816123316076,0,0,0,0,0,0,2.21598163412751,0.601633342410425,1.08505435357926,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0.242584061187816,2.09186133215116,1.23350366406548,0.929119112685311,3.45230870786581,2.30544635876191,1.6553756092201,4.13694816883942,0.645484683583826,2.70852973188684,2.07066573496865,1.63743690034707,1.12361742222542,2.14258724659632,3.85114832491312,5.75403413219137,1.31940520074686,1.39624560335142,1.70489900213078,5.80418477257168,9.07816359505824,4.9825779919646,3.51748131359441,2.08593167368081,0.65156653411535,1.81619850790011,2.94622108790052,4.1140110367315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0.973269740605272,0,0,0,0.327447688744282,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0.264818361626438,0,0.354668382198357,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0.448346041655403,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.751190294532984,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0.286804595389004,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,1.01056513432752,0.925971025153221,1.71228737011138,0,0,0.738651018262192,0.234004265139238,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0.602878754119172,0,0.099972991182057,2.43247561282381,0.502257091432126,2.10833939483032,0,0,0,0,0.205476322550383,0,0.112085143993527,0,0,0,0,0,0,0,0,0.749007023947182,2.99161459204025,3.31532410748828,0.24538298343828,0.500170521059677,0.542530047399471,0.623912584592421,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0.519254429183621,0,0,0,0,0,0,0.393373244878272,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0.165018999841176,0,0,0,0.096670718292122,0,0,0.275673144969061,0.107420244868274,0,0,0,0,0.192190067365106,0,0,0,0,0,0.308033580176089,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.974853958525138,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,1.68886108238131,0.987884678879706,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0.764637207142375,0,0.476463550915578,0,0.648473311192717,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.284136146806413,0,0,0,0,0,0,0.494411622680279,0,0,0.276283915531148,0,0.20453736500431,0.123084805461069,0,0.0898683511473268,1.43216939740487,0,0.394573622547734,0,0,0,0.371072392647405,0,0,0,0.724999575434793,0.227586896570999,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.230850775511391,1.93701494939902,0,0,0,0,0,0.533034776018635,0,0,0.332423363800313,0,0,0.167821586975843,0,0.317873157960757,0,0,0,0,0,0.619202951523374,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.63186579628488,0,0,0.664653872707185,0.330991955875499,0,0,0,0,0,0.293977192243133,0,0.17472666824203,0,0,0.0730893170861856,0,0.193978032976839,0,0.451961481561065,0,0.596143835108969,0,0,0.561111741760736,0,0,0,0,0,0.14405479798815,0,0.235694034616795,0.271808412147228,0.313808538937,0.101998217636322,0,0,0.273810757783986,0,0.859530882839914,0,1.11712960508902,0,4.30723814746088,0.199679000498991,0.858452096273142,0.446342914883745,0.268733889946905,1.80149941771202,0,0,0.0824158583811665,0,0,0.169346664131569,0,0.136203406111576,0,0,0,0,0,0,0,2.99461687736953,0.104909176269996,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,0,0.879313402068495,0,0,0.13223260174269,0,0,0.533937062838473,0.157204305099666,0.414239055347196,0.992332043623902,0,0,0,1.08803560673895,0,0.306345576763462,1.31149052283922,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0,0,0.249960815924213,0.454947352624943,0,0.235265819698172,0,0,0,0,0,0.378806010550178,0,0.889811221596536,0,0,0,0,0.796483835818512,0.899606224327209,0.621051827505038,0,0,0,0,0.761610424337591,0,0,0.322231671127465,0.464033759878494,0,0,0,0,0,0,1.28664954824955,0,0,0,0,0,0,0,0,0.38582807654183,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0.368211900503681,0,0,0,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0.41023272848151,0,0,0.322951291263702,1.42769420259154,0.0981477185010256,0,0.366857197043358,0.231051332300676,0,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0.177404740325278,0,0.3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| ||
|short_description=p5@BC041951 | |||
}} | }} |
Latest revision as of 21:37, 30 July 2015
Short description: | p5@BC041951 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BC041951_5end |
Coexpression cluster: | C954_heart_CD14_Neutrophils_Eosinophils_Lymphatic_renal_Monocytederived |
Association with transcript: | -7bp_to_BC041951_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.07e-54 | 48 |
phagocyte | 8.07e-54 | 48 |
classical monocyte | 2.16e-53 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.16e-53 | 42 |
myeloid leukocyte | 1.29e-44 | 72 |
monopoietic cell | 1.36e-41 | 59 |
monocyte | 1.36e-41 | 59 |
monoblast | 1.36e-41 | 59 |
promonocyte | 1.36e-41 | 59 |
macrophage dendritic cell progenitor | 5.16e-40 | 61 |
myeloid lineage restricted progenitor cell | 1.75e-36 | 66 |
granulocyte monocyte progenitor cell | 7.69e-36 | 67 |
myeloid cell | 3.48e-27 | 108 |
common myeloid progenitor | 3.48e-27 | 108 |
leukocyte | 5.50e-20 | 136 |
nongranular leukocyte | 4.74e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 5.13e-17 | 120 |
hematopoietic oligopotent progenitor cell | 1.11e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.11e-15 | 161 |
hematopoietic stem cell | 1.04e-14 | 168 |
hematopoietic cell | 1.43e-13 | 177 |
eosinophil | 8.18e-09 | 2 |
granulocyte | 5.80e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.37e-31 | 76 |
bone element | 4.69e-28 | 82 |
immune system | 6.99e-28 | 93 |
skeletal element | 5.88e-25 | 90 |
skeletal system | 1.34e-23 | 100 |
hemolymphoid system | 5.33e-23 | 108 |
hematopoietic system | 2.31e-22 | 98 |
blood island | 2.31e-22 | 98 |
musculoskeletal system | 5.78e-16 | 167 |
lateral plate mesoderm | 1.06e-13 | 203 |
cardiac chamber | 1.46e-11 | 3 |
cardiac atrium | 1.67e-08 | 2 |
future cardiac atrium | 1.67e-08 | 2 |
atrioventricular valve | 2.61e-08 | 2 |
mesoderm | 6.70e-08 | 315 |
mesoderm-derived structure | 6.70e-08 | 315 |
presumptive mesoderm | 6.70e-08 | 315 |