FFCP PHASE1:Hg19::chr6:150690053..150690058,+: Difference between revisions
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|id=chr6:150690053..150690058,+
|short_description=p3@IYD
|description=CAGE_peak_3_at_IYD_5end
|association_with_transcript=25bp_to_ENST00000229447,ENST00000344419,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=389434 | |EntrezGene=389434 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21071 | |HGNC=21071 | ||
|TSSclassifier=strong | |||
|UniProt=C9JFW2,Q6PHW0,Q2VPV9 | |UniProt=C9JFW2,Q6PHW0,Q2VPV9 | ||
|association_with_transcript=25bp_to_ENST00000229447,ENST00000344419,NM_001164694,NM_001164695,NM_203395,uc003qnu.1,uc003qnv.1,uc003qnw.1,uc003qnx.1,uc010kik.1_5end | |||
|cluster_id=chr6:150690053..150690058,+ | |||
|coexpression_cluster_id=C113 | |||
|description=CAGE_peak_3_at_IYD_5end | |||
|id=chr6:150690053..150690058,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.59e-27;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!1.60e-27!2;UBERON:0002046!6.70e-12!5;UBERON:0004117!6.70e-12!5;UBERON:0007689!6.70e-12!5;UBERON:0007123!6.70e-12!5;UBERON:0003091!6.70e-12!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.59e-27;5!UBERON:0000341;7.67e-18;2!UBERON:0002368;4.22e-09;33!UBERON:0000974;8.02e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.59e-27,5;UBERON:0004117,1.59e-27,5;UBERON:0007689,1.59e-27,5;UBERON:0007123,1.59e-27,5;UBERON:0003091,1.59e-27,5;UBERON:0000341,7.67e-18,2;UBERON:0009722,4.00e-13,11;UBERON:0007690,4.00e-13,11;UBERON:0002368,2.81e-09,35;UBERON:0008814,2.09e-08,18;UBERON:0000949,2.28e-07,45 | |||
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|short_description=p3@IYD | |||
}} | }} |
Latest revision as of 03:40, 16 September 2015
Short description: | p3@IYD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IYD_5end |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | 25bp_to_ENST00000229447, ENST00000344419, NM_001164694, NM_001164695, NM_203395, uc003qnu.1, uc003qnv.1, uc003qnw.1, uc003qnx.1, uc010kik.1_5end |
EntrezGene: | IYD |
HGNC: | 21071 |
UniProt: | C9JFW2Q6PHW0Q2VPV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.59e-27 | 5 |
pharyngeal pouch | 1.59e-27 | 5 |
thyroid diverticulum | 1.59e-27 | 5 |
pharyngeal pouch 2 | 1.59e-27 | 5 |
thyroid primordium | 1.59e-27 | 5 |
throat | 7.67e-18 | 2 |
entire pharyngeal arch endoderm | 4.00e-13 | 11 |
early pharyngeal endoderm | 4.00e-13 | 11 |
endocrine gland | 2.81e-09 | 35 |
pharyngeal arch system | 2.09e-08 | 18 |
endocrine system | 2.28e-07 | 45 |