FFCP PHASE1:Hg19::chr6:134758827..134758863,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:134758827..134758863,+
|short_description=p1@LOC154092
|description=CAGE_peak_1_at_LOC154092_5end
|association_with_transcript=0bp_to_ENST00000431422,NR_03...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=154092 | |EntrezGene=154092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000431422,NR_038216,NR_038217,uc003qet.1_5end | |||
|cluster_id=chr6:134758827..134758863,+ | |||
|coexpression_cluster_id=C314 | |||
|description=CAGE_peak_1_at_LOC154092_5end | |||
|id=chr6:134758827..134758863,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.07e-62!76;CL:0002009!4.21e-61!65;CL:0000557!6.54e-61!71;CL:0002057!1.37e-58!42;CL:0002194!2.27e-58!63;CL:0000576!2.27e-58!63;CL:0000040!2.27e-58!63;CL:0000559!2.27e-58!63;CL:0000839!4.28e-57!70;CL:0000860!5.95e-56!45;CL:0000763!4.33e-40!112;CL:0000049!4.33e-40!112;CL:0000738!8.11e-39!140;CL:0002087!2.82e-34!119;CL:0002031!1.46e-33!124;CL:0000037!3.16e-28!172;CL:0000566!3.16e-28!172;CL:0000988!3.67e-27!182;CL:0002032!4.73e-27!165;CL:0000837!4.73e-27!165;CL:0002393!6.15e-12!9;CL:0002397!6.15e-12!9;CL:0000219!7.02e-08!390;CL:0000840!2.77e-07!5;CL:0001029!2.77e-07!5;CL:0000235!3.41e-07!10;CL:0000134!3.43e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.68e-73;39!CL:0000234;1.68e-73;39!CL:0000860;1.06e-71;33!CL:0002057;1.06e-71;33!CL:0000576;4.90e-46;48!CL:0000766;1.79e-37;69!CL:0000235;7.04e-18;6!CL:0000763;4.73e-17;100!CL:0002393;1.71e-15;6!CL:0002397;1.71e-15;6!CL:0000738;2.59e-13;136!CL:0000840;1.19e-12;5!CL:0002087;6.55e-11;104!CL:0000767;1.20e-08;3!CL:0000990;2.77e-08;8!CL:0000988;6.75e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.71e-103,48;CL:0000234,7.71e-103,48;CL:0002009,2.31e-98,61;CL:0002194,2.44e-93,59;CL:0000576,2.44e-93,59;CL:0000040,2.44e-93,59;CL:0000559,2.44e-93,59;CL:0000557,1.58e-92,67;CL:0000766,1.89e-92,72;CL:0000839,3.86e-86,66;CL:0000860,6.53e-86,42;CL:0002057,6.53e-86,42;CL:0000763,9.82e-63,108;CL:0000049,9.82e-63,108;CL:0000738,1.97e-53,136;CL:0002087,1.14e-48,115;CL:0002031,1.55e-48,120;CL:0000037,1.14e-40,168;CL:0002032,1.49e-39,161;CL:0000837,1.49e-39,161;CL:0000988,6.57e-38,177;CL:0000235,6.94e-18,6;CL:0000219,3.54e-14,386;CL:0000134,1.28e-13,354;CL:0002320,4.34e-13,361;CL:0000840,1.19e-12,5;CL:0001029,1.19e-12,5;CL:0000048,3.26e-10,427;CL:0002393,3.95e-10,9;CL:0002397,3.95e-10,9;CL:0000034,4.61e-10,441;CL:0000723,7.04e-10,433;CL:0000767,1.31e-08,3;CL:0000990,2.77e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.82e-63;42!CL:0000049;2.02e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.30e-52!80;UBERON:0001474!8.40e-47!86;UBERON:0002390!1.24e-45!102;UBERON:0003061!1.24e-45!102;UBERON:0002193!1.20e-39!112;UBERON:0004765!1.85e-38!101;UBERON:0001434!1.85e-38!101;UBERON:0002405!4.52e-30!115;UBERON:0002204!4.46e-20!167;UBERON:0003081!4.81e-17!216;UBERON:0002020!6.04e-08!34;UBERON:0003528!6.04e-08!34;UBERON:0001049!1.28e-07!57;UBERON:0005068!1.28e-07!57;UBERON:0006241!1.28e-07!57;UBERON:0007135!1.28e-07!57;UBERON:0002780!1.47e-07!41;UBERON:0001890!1.47e-07!41;UBERON:0006240!1.47e-07!41;UBERON:0003080!2.87e-07!42;UBERON:0002791!3.33e-07!33;UBERON:0002616!4.11e-07!59;UBERON:0001893!7.01e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.43e-80,76;UBERON:0001474,1.87e-73,82;UBERON:0004765,7.45e-66,90;UBERON:0002390,9.38e-65,98;UBERON:0003061,9.38e-65,98;UBERON:0002405,2.45e-63,93;UBERON:0001434,4.76e-58,100;UBERON:0002193,1.35e-57,108;UBERON:0002204,8.51e-33,167;UBERON:0003081,1.78e-28,203;UBERON:0000926,1.19e-13,315;UBERON:0004120,1.19e-13,315;UBERON:0006603,1.19e-13,315;UBERON:0002384,3.83e-13,371 | |||
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| ||
|short_description=p1@LOC154092 | |||
}} | }} |
Latest revision as of 22:25, 24 September 2015
Short description: | p1@LOC154092 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC154092_5end |
Coexpression cluster: | C314_Macrophage_Dendritic_Monocytederived_CD14_Esophageal_Mast_Keratinocyte |
Association with transcript: | 0bp_to_ENST00000431422, NR_038216, NR_038217, uc003qet.1_5end |
EntrezGene: | LOC154092 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.43e-80 | 76 |
bone element | 1.87e-73 | 82 |
skeletal element | 7.45e-66 | 90 |
hematopoietic system | 9.38e-65 | 98 |
blood island | 9.38e-65 | 98 |
immune system | 2.45e-63 | 93 |
skeletal system | 4.76e-58 | 100 |
hemolymphoid system | 1.35e-57 | 108 |
musculoskeletal system | 8.51e-33 | 167 |
lateral plate mesoderm | 1.78e-28 | 203 |
mesoderm | 1.19e-13 | 315 |
mesoderm-derived structure | 1.19e-13 | 315 |
presumptive mesoderm | 1.19e-13 | 315 |
connective tissue | 3.83e-13 | 371 |