FFCP PHASE1:Hg19::chr6:125573037..125573043,+: Difference between revisions
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|id=chr6:125573037..125573043,+
|short_description=p@chr6:125573037..125573043,+
|description=CAGE_peak_at_chr6:125573037..125573043,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:125573037..125573043,+ | |||
|coexpression_cluster_id=C540 | |||
|description=CAGE_peak_at_chr6:125573037..125573043,+ | |||
|id=chr6:125573037..125573043,+ | |||
|ontology_enrichment_celltype=CL:0000153!1.27e-17!9;CL:0000447!1.27e-17!9;CL:0000667!2.24e-15!6;CL:0000058!2.24e-15!6;CL:0000138!2.24e-15!6;CL:0000327!2.08e-11!14;CL:0000499!5.85e-09!27 | |||
|ontology_enrichment_celltype_v019=CL:0000222;2.21e-40;1!CL:0000138;2.54e-27;6!CL:0000153;1.29e-18;9!CL:0000447;1.29e-18;9!CL:0000135;1.31e-14;3!CL:0000388;1.31e-14;3!CL:0002579;1.83e-14;3!CL:0000499;1.40e-13;28!CL:0000327;1.31e-11;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,2.08e-27,6;CL:0000138,2.08e-27,6;CL:0000153,1.13e-18,9;CL:0000447,1.13e-18,9;CL:0000135,1.40e-14,3;CL:0000388,1.40e-14,3;CL:0002579,2.09e-14,3;CL:0000499,1.34e-13,28;CL:0000327,1.21e-11,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2513!6.77e-11!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002146!4.58e-11!1;UBERON:0005623!4.58e-11!1;UBERON:0004457!1.08e-07!12;UBERON:0000042!1.08e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.31e-14;3!UBERON:0000043;1.31e-14;3!UBERON:0007845;1.31e-14;3!UBERON:0003688;6.78e-08;6!UBERON:0002358;6.78e-08;6!UBERON:0003684;6.78e-08;6!UBERON:0001178;6.78e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.40e-14,3;UBERON:0000043,1.40e-14,3;UBERON:0007845,1.40e-14,3;UBERON:0003688,7.25e-08,6;UBERON:0002358,7.25e-08,6;UBERON:0003684,7.25e-08,6;UBERON:0001178,7.25e-08,6 | |||
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|short_description=p@chr6:125573037..125573043,+ | |||
}} | }} |
Latest revision as of 19:07, 30 July 2015
Short description: | p@chr6:125573037..125573043, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:125573037..125573043, + |
Coexpression cluster: | C540_tenocyte_Chondrocyte_Adipocyte_normal_Synoviocyte_Fibroblast_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.08e-27 | 6 |
chondrocyte | 2.08e-27 | 6 |
GAG secreting cell | 1.13e-18 | 9 |
carbohydrate secreting cell | 1.13e-18 | 9 |
fibrocyte | 1.40e-14 | 3 |
tendon cell | 1.40e-14 | 3 |
omentum preadipocyte | 2.09e-14 | 3 |
stromal cell | 1.34e-13 | 28 |
extracellular matrix secreting cell | 1.21e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.40e-14 | 3 |
tendon | 1.40e-14 | 3 |
regular connective tissue | 1.40e-14 | 3 |
omentum | 7.25e-08 | 6 |
peritoneum | 7.25e-08 | 6 |
abdominal cavity | 7.25e-08 | 6 |
visceral peritoneum | 7.25e-08 | 6 |