FFCP PHASE1:Hg19::chr6:125540918..125540931,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:125540918..125540931,+
|short_description=p6@TPD52L1
|description=CAGE_peak_6_at_TPD52L1_5end
|association_with_transcript=-59bp_to_ENST00000524679_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7164 | |EntrezGene=7164 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12006 | |HGNC=12006 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-59bp_to_ENST00000524679_5end | |||
|cluster_id=chr6:125540918..125540931,+ | |||
|coexpression_cluster_id=C311 | |||
|description=CAGE_peak_6_at_TPD52L1_5end | |||
|id=chr6:125540918..125540931,+ | |||
|ontology_enrichment_celltype=CL:0000064!5.30e-11!3;CL:0005012!5.30e-11!3;CL:0000067!5.30e-11!3;CL:0002304!5.30e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0002563;1.29e-11;4!CL:0000342;1.39e-11;1!CL:0002565;1.39e-11;1!CL:0000313;1.39e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.26e-11,4;CL:0000313,1.32e-11,1;CL:0000342,1.47e-11,1;CL:0002565,1.47e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.64e-12;1 | |||
|ontology_enrichment_disease=DOID:1909!9.41e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:178;1.39e-11;1!DOID:326;1.39e-11;1!DOID:3978;1.39e-11;1!DOID:3394;1.39e-11;1!DOID:2152;1.39e-11;1!DOID:5844;1.39e-11;1!DOID:3119;1.79e-07;14!DOID:299;7.50e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.32e-11,1;DOID:178,1.63e-11,1;DOID:326,1.63e-11,1;DOID:3978,1.63e-11,1;DOID:3394,1.63e-11,1;DOID:5844,1.63e-11,1;DOID:3119,1.77e-07,14;DOID:299,7.10e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0007625!4.85e-15!11;UBERON:0000488!1.96e-14!4;UBERON:0001456!3.71e-12!21;UBERON:0001896!2.04e-11!3;UBERON:0005290!2.04e-11!3;UBERON:0010096!2.04e-11!3;UBERON:0001778!5.30e-11!3;UBERON:0001775!5.30e-11!3;UBERON:0000020!7.32e-11!23;UBERON:0000019!9.81e-11!19;UBERON:0000047!9.81e-11!19;UBERON:0004088!9.81e-11!19;UBERON:0003072!9.81e-11!19;UBERON:0003071!9.81e-11!19;UBERON:0004128!9.81e-11!19;UBERON:0001032!2.43e-10!24;UBERON:0004456!2.43e-10!24;UBERON:0003075!3.72e-10!86;UBERON:0007284!3.72e-10!86;UBERON:0000970!3.94e-10!20;UBERON:0002203!1.20e-09!6;UBERON:0001768!1.20e-09!6;UBERON:0002104!1.38e-09!21;UBERON:0002346!1.62e-09!90;UBERON:0001052!2.44e-09!4;UBERON:0003296!6.17e-09!4;UBERON:0010133!6.17e-09!4;UBERON:0000007!1.67e-08!2;UBERON:0003056!4.20e-08!61;UBERON:0004907!1.53e-07!5;UBERON:0000033!2.36e-07!123;UBERON:0000966!6.12e-07!5;UBERON:0005388!6.12e-07!5;UBERON:0001802!6.12e-07!5;UBERON:0000153!8.26e-07!129;UBERON:0007811!8.26e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.04e-11;4!UBERON:0001242;1.29e-11;4!UBERON:0001262;1.29e-11;4!UBERON:0004786;1.29e-11;4!UBERON:0004808;1.29e-11;4!UBERON:0001277;1.29e-11;4!UBERON:0004911;1.39e-11;1!UBERON:0002506;1.39e-11;1!UBERON:0001769;1.39e-11;1!UBERON:0000488;3.41e-11;4!UBERON:0004907;1.52e-09;5!UBERON:0002203;9.33e-08;6!UBERON:0001768;9.33e-08;6!UBERON:0002200;9.33e-08;6!UBERON:0005409;1.07e-07;22!UBERON:0000485;5.26e-07;7!UBERON:0003929;5.26e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.02e-11,4;UBERON:0001242,1.26e-11,4;UBERON:0001262,1.26e-11,4;UBERON:0004786,1.26e-11,4;UBERON:0004808,1.26e-11,4;UBERON:0001277,1.26e-11,4;UBERON:0004911,1.32e-11,1;UBERON:0002506,1.47e-11,1;UBERON:0001769,1.47e-11,1;UBERON:0000488,3.99e-11,4;UBERON:0004907,1.49e-09,5;UBERON:0002203,1.03e-07,6;UBERON:0001768,1.03e-07,6;UBERON:0002200,1.03e-07,6;UBERON:0005409,7.90e-07,25 | |||
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| ||
|short_description=p6@TPD52L1 | |||
}} | }} |
Latest revision as of 07:26, 20 September 2015
Short description: | p6@TPD52L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TPD52L1_5end |
Coexpression cluster: | C311_rectal_heart_choriocarcinoma_placenta_chorionic_lung_ductal |
Association with transcript: | -59bp_to_ENST00000524679_5end |
EntrezGene: | TPD52L1 |
HGNC: | 12006 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.26e-11 | 4 |
serous secreting cell | 1.32e-11 | 1 |
pigment cell (sensu Vertebrata) | 1.47e-11 | 1 |
iris pigment epithelial cell | 1.47e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.02e-11 | 4 |
intestinal mucosa | 1.26e-11 | 4 |
wall of intestine | 1.26e-11 | 4 |
gastrointestinal system mucosa | 1.26e-11 | 4 |
gastrointestinal system epithelium | 1.26e-11 | 4 |
intestinal epithelium | 1.26e-11 | 4 |
epithelium of female gonad | 1.32e-11 | 1 |
iris epithelium | 1.47e-11 | 1 |
iris | 1.47e-11 | 1 |
atypical epithelium | 3.99e-11 | 4 |
lower digestive tract | 1.49e-09 | 5 |
vasculature of eye | 1.03e-07 | 6 |
uvea | 1.03e-07 | 6 |
vasculature of head | 1.03e-07 | 6 |
gastrointestinal system | 7.90e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.32e-11 | 1 |
vascular disease | 1.63e-11 | 1 |
ischemia | 1.63e-11 | 1 |
extrinsic cardiomyopathy | 1.63e-11 | 1 |
myocardial ischemia | 1.63e-11 | 1 |
myocardial infarction | 1.63e-11 | 1 |
gastrointestinal system cancer | 1.77e-07 | 14 |
adenocarcinoma | 7.10e-07 | 25 |