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|PWM=P0;A;C;G;T!1;0.448140902284075;0.0822566840190749;0.141153108368666;0.328449305328185!2;0.354009738798938;0.179239151897562;0.231684421159074;0.235066688144426!3;0.300225965209272;0.196857457322993;0.192402667151399;0.310513910316336!4;0.269191898789798;0.228296397470123;0.25972728567324;0.242784418066838!5;0.325457965318915;0.00873718477050343;0.038497379134656;0.627307470775925!6;0.907257876004096;0.0132014244525994;0.0158752999135587;0.0636653996297463!7;0.010498897169293;0.935216460498987;0.00778361706921477;0.0465010252625051!8;0.897815577262291;0.0013318531385906;0.019141458009047;0.0817111115900716!9;0.0817111115900716;0.019141458009047;0.0013318531385906;0.897815577262291!10;0.0465010252625051;0.00778361706921477;0.935216460498987;0.010498897169293!11;0.0636653996297463;0.0158752999135587;0.0132014244525994;0.907257876004096!12;0.627307470775925;0.038497379134656;0.00873718477050343;0.325457965318915!13;0.563710352209611;0.193341206749883;0.098814902998096;0.144133538042409!14;0.461314426454503;0.0791247916307484;0.155616819860522;0.303943962054227!15;0.513284437858598;0.10843853982028;0.126001560128783;0.25227546219234!16;0.195487053653612;0.320892606318747;0.240954891717435;0.242665448310206!17;0.385007616736654;0.137791187866151;0.149761652407215;0.32743954298998
|PWM=P0;A;C;G;T!1;0.448140902284075;0.0822566840190749;0.141153108368666;0.328449305328185!2;0.354009738798938;0.179239151897562;0.231684421159074;0.235066688144426!3;0.300225965209272;0.196857457322993;0.192402667151399;0.310513910316336!4;0.269191898789798;0.228296397470123;0.25972728567324;0.242784418066838!5;0.325457965318915;0.00873718477050343;0.038497379134656;0.627307470775925!6;0.907257876004096;0.0132014244525994;0.0158752999135587;0.0636653996297463!7;0.010498897169293;0.935216460498987;0.00778361706921477;0.0465010252625051!8;0.897815577262291;0.0013318531385906;0.019141458009047;0.0817111115900716!9;0.0817111115900716;0.019141458009047;0.0013318531385906;0.897815577262291!10;0.0465010252625051;0.00778361706921477;0.935216460498987;0.010498897169293!11;0.0636653996297463;0.0158752999135587;0.0132014244525994;0.907257876004096!12;0.627307470775925;0.038497379134656;0.00873718477050343;0.325457965318915!13;0.563710352209611;0.193341206749883;0.098814902998096;0.144133538042409!14;0.461314426454503;0.0791247916307484;0.155616819860522;0.303943962054227!15;0.513284437858598;0.10843853982028;0.126001560128783;0.25227546219234!16;0.195487053653612;0.320892606318747;0.240954891717435;0.242665448310206!17;0.385007616736654;0.137791187866151;0.149761652407215;0.32743954298998
|entrez_gene_id=50805
|entrez_gene_id=50805
|motif_cluster_2013_march_motif_members= /UNIPROBE:Irx5_2385.1;CELL08~Irx3_2226.1;CELL08~Irx3_0920.1;CELL08~Irx2_0900.3;CELL08~Irx4_2242.3;CELL08~Irx6_2623.2;CELL08
|motif_cluster_2013_march_motif_members= /UNIPROBE:Irx3_2226.1;CELL08~Irx3_0920.1;CELL08~Irx2_0900.3;CELL08~Irx6_2623.2;CELL08~Irx4_2242.3;CELL08~Irx5_2385.1;CELL08
|name=known56
|name=non-redundant56
|representative_motif_db=UNIPROBE
|representative_motif_db=UNIPROBE
|representative_motif_id=Irx4_2242.3
|representative_motif_id=Irx4_2242.3
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[[Category:Motif]]
[[Category:Motif]]
[[Category:MotifCluster2013March]]
[[Category:MotifCluster2013March]]
[[Category:NonRedundantMotifCluster]]

Latest revision as of 10:21, 30 May 2013

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant56
  • db :UNIPROBE
  • Id :Irx4_2242.3
  • name :CELL08
  • score :0.06622895318704682
  • External refs:
EntrezGene:50805
UniProt:50805

  • Internal refs:
EntrezGene:50805


Motif matrix
P0ACGT
10.4481409022840750.08225668401907490.1411531083686660.328449305328185
20.3540097387989380.1792391518975620.2316844211590740.235066688144426
30.3002259652092720.1968574573229930.1924026671513990.310513910316336
40.2691918987897980.2282963974701230.259727285673240.242784418066838
50.3254579653189150.008737184770503430.0384973791346560.627307470775925
60.9072578760040960.01320142445259940.01587529991355870.0636653996297463
70.0104988971692930.9352164604989870.007783617069214770.0465010252625051
80.8978155772622910.00133185313859060.0191414580090470.0817111115900716
90.08171111159007160.0191414580090470.00133185313859060.897815577262291
100.04650102526250510.007783617069214770.9352164604989870.010498897169293
110.06366539962974630.01587529991355870.01320142445259940.907257876004096
120.6273074707759250.0384973791346560.008737184770503430.325457965318915
130.5637103522096110.1933412067498830.0988149029980960.144133538042409
140.4613144264545030.07912479163074840.1556168198605220.303943962054227
150.5132844378585980.108438539820280.1260015601287830.25227546219234
160.1954870536536120.3208926063187470.2409548917174350.242665448310206
170.3850076167366540.1377911878661510.1497616524072150.32743954298998

Sub Motif Members

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