NonredundantMotifs:84: Difference between revisions
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{{Known_motif | {{Known_motif | ||
|entrez_gene_id= | |PWM=P0;A;C;G;T!1;6.822545901012192;3.088727049493904;10.103514891076204;5.985212158417674!2;2.059151366329265;4.11830273265853;10.748606693100614;9.073939207911577!3;0.0;7.014787841582326;16.088727049493905;2.896485108923796!4;2.059151366329265;0.0;14.866909425759145;9.073939207911577!5;2.059151366329265;2.896485108923796;11.970424316835373;9.073939207911577!6;4.11830273265853;0.8373337425945206;11.133090574240857;9.911272950506095!7;0.0;0.8373337425945206;20.207029782152436;4.955636475253048!8;0.0;3.7338188515183144;13.192241940570106;9.073939207911577!9;0.0;0.8373337425945206;17.310544673228637;7.852121584176844!10;0.0;0.8373337425945206;23.103514891076205;2.059151366329265!11;0.0;2.5120012277835615;15.251393306899386;8.23660546531706!12;0.0;0.0;1.6746674851890413;24.325332514810967!13;0.8373337425945206;0.0;24.325332514810967;0.8373337425945206!14;2.059151366329265;2.5120012277835615;12.35490819797559;9.073939207911577!15;0.0;0.8373337425945206;6.177454098987808;18.985212158417674!16;1.6746674851890413;0.8373337425945206;4.11830273265853;19.369696039557915!17;0.0;0.8373337425945206;8.23660546531706;16.92606079208842!18;0.0;1.6746674851890413;24.325332514810967;0.0!19;1.6746674851890413;0.0;17.310544673228637;7.014787841582326!20;0.0;0.8373337425945206;22.266181148481685;2.896485108923796!21;0.0;0.0;17.310544673228637;8.689455326771363!22;3.926060792088422;3.5415769109482063;5.147878415823156;13.384483881140218 | ||
|motif_cluster_2013_march_motif_members= /JASPAR:MA0073.1;RREB1 | |entrez_gene_id=6239 | ||
|name= | |motif_cluster_2013_march_motif_members= /HOCOMOCO:RREB1_si /JASPAR:MA0073.1;RREB1 /SWISSREGULON:RREB1.p2 | ||
|representative_motif_db= | |name=non-redundant84 | ||
|representative_motif_id= | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=RREB1_si | |||
|representative_motif_name= | |representative_motif_name= | ||
|score= | |score=0.9143172944708631 | ||
|uniprot_entry_name= | |uniprot_entry_name=RREB1_HUMAN | ||
}} | }} | ||
[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:21, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant84
- db :HOCOMOCO
- Id :RREB1_si
- name :
- score :0.9143172944708631
- External refs:
- Internal refs:
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Sub Motif Members
