NonredundantMotifs:81: Difference between revisions
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;459.6482378837819;96.09477677343197;1224.895759227304;59.3612261154826!2;228.7356565278479;1341.176072363288;159.73544651862176;110.35282459023995!3;142.8897989358737;70.92582738783271;1560.4967811010458;65.68759257525049!4;12.496929952152906;1613.359009101849;181.371187642889;32.77287330311234!5;1640.3642566894364;75.30574133333585;89.0022614295485;35.3277405476823!6;197.13822138306224;233.22683148024367;526.6178427595805;883.0171043771117!7;45.44509022654141;34.812190632164445;1505.2169955028444;254.52572363845113!8;54.06734515039869;1672.1027634923753;41.679315506862444;72.15057585036644!9;34.358506706508805;117.02377717706426;1535.2496669117772;153.36804920465113!10;91.63610232054292;1587.7746509665565;158.47549205928038;2.113754653623224!11;1344.8979947205348;151.74442282809497;300.41001415233774;42.94756829903626!12;278.0654036310247;391.337742417677;989.0245281868343;181.572325764463 | |||
|entrez_gene_id=4899 | |entrez_gene_id=4899 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:NRF1_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:NRF1_f1 /HOMER:NRF1_MCF7-NRF1-ChIP-Seq /SWISSREGULON:NRF1.p2 | ||
|name= | |name=non-redundant81 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=NRF1_f1 | |representative_motif_id=NRF1_f1 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:21, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant81
- db :HOCOMOCO
- Id :NRF1_f1
- name :
- score :2.270786702393942
- External refs:
- Internal refs:
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Sub Motif Members
