NonredundantMotifs:207: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Known_motif
|entrez_gene_id=8521
|motif_cluster_2013_march_motif_members= /UNIPROBE:Gcm1_secondary;SCI09
|name=known207
|representative_motif_db=UNIPROBE
|representati...") |
m (Autoedit moved page NonredundantMotifs:Motif207 to NonredundantMotifs:207 without leaving a redirect: NSchange) |
||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.298360284626179;0.124864928840929;0.240783052041331;0.335991734491562!2;0.184299645185153;0.17461719160416;0.373392099087098;0.267691064123589!3;0.150631616427434;0.435098682963459;0.254062258194144;0.160207442414963!4;0.212569130734739;0.220346774757132;0.370970758259475;0.196113336248654!5;0.258171019602728;0.316689142831233;0.186896432220568;0.238243405345471!6;0.872370741639165;0.05170333320847;0.0707912362238046;0.00513468892856083!7;0.0115601519285019;0.0176715220534332;0.00974648864772653;0.961021837370338!8;0.888546215091524;0.0429637769696799;0.0617580753899475;0.00673193254884886!9;0.071365352493578;0.00998162295762339;0.801504821716069;0.117148202832729!10;0.0106570468781062;0.0149609902305669;0.949285828707523;0.0250961341838044!11;0.00449602133633187;0.00994130982819472;0.97838056019994;0.00718210863553357!12;0.0056454622449419;0.0102940436244647;0.972682109072685;0.0113783850579088!13;0.499894710036396;0.152322217980078;0.335875323944902;0.0119077480386241!14;0.109409732586614;0.346383955828245;0.380529062059147;0.163677249525994!15;0.371763615486741;0.0961816796074846;0.457998629174618;0.0740560757311557!16;0.45020714224879;0.392208089691539;0.0656863122590817;0.0918984558005887!17;0.104224395861056;0.228466891608051;0.391472950013122;0.275835762517771 | |||
|entrez_gene_id=8521 | |entrez_gene_id=8521 | ||
|motif_cluster_2013_march_motif_members= /UNIPROBE:Gcm1_secondary;SCI09 | |motif_cluster_2013_march_motif_members= /UNIPROBE:Gcm1_secondary;SCI09 | ||
|name= | |name=non-redundant207 | ||
|representative_motif_db=UNIPROBE | |representative_motif_db=UNIPROBE | ||
|representative_motif_id=Gcm1_secondary | |representative_motif_id=Gcm1_secondary | ||
| Line 11: | Line 12: | ||
[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant207
- db :UNIPROBE
- Id :Gcm1_secondary
- name :SCI09
- score :0.44591874875310084
- External refs:
- Internal refs:
| Motif matrix | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sub Motif Members
