NonredundantMotifs:161: Difference between revisions
From FANTOM5_SSTAR
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|entrez_gene_id=6929
|motif_cluster_2013_march_motif_members= /UNIPROBE:Tcf3_secondary;SCI09
|name=known161
|representative_motif_db=UNIPROBE
|representati...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.337360773033156;0.181847977548516;0.282899922228275;0.197891327190053!2;0.192381746250749;0.237864199583053;0.390654768803585;0.179099285362614!3;0.134396669993062;0.374784928276613;0.355692549986183;0.135125851744141!4;0.113674629695326;0.477609064918589;0.347987885586672;0.0607284197994129!5;0.187410878961973;0.212669418109555;0.392109140443397;0.207810562485075!6;0.497832366135208;0.111474097760759;0.194855153898222;0.195838382205811!7;0.526042548104382;0.126711897431175;0.214264714198468;0.132980840265976!8;0.433875715897945;0.180022889133487;0.104859845650795;0.281241549317774!9;0.539525437220504;0.140191847800165;0.113373951274975;0.206908763704357!10;0.397300566969792;0.176841563453792;0.115802258798458;0.310055610777958!11;0.529440699119821;0.199806502920201;0.148594621260007;0.122158176699972!12;0.4850352838372;0.166230925472943;0.150350092347644;0.198383698342214!13;0.532478842630498;0.165909783352405;0.177757490306664;0.123853883710433!14;0.35118908553611;0.173665229150724;0.138509068698377;0.336636616614788!15;0.26068807693612;0.223763841128377;0.189060223277131;0.326487858658372 | |||
|entrez_gene_id=6929 | |entrez_gene_id=6929 | ||
|motif_cluster_2013_march_motif_members= /UNIPROBE:Tcf3_secondary;SCI09 | |motif_cluster_2013_march_motif_members= /UNIPROBE:Tcf3_secondary;SCI09 | ||
|name= | |name=non-redundant161 | ||
|representative_motif_db=UNIPROBE | |representative_motif_db=UNIPROBE | ||
|representative_motif_id=Tcf3_secondary | |representative_motif_id=Tcf3_secondary | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant161
- db :UNIPROBE
- Id :Tcf3_secondary
- name :SCI09
- score :0.005818554593992047
- External refs:
- Internal refs:
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Sub Motif Members
