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{{Known_motif
{{Known_motif
|PWM=P0;A;C;G;T!1;0.110411824619312;0.519909514021034;0.162398432256492;0.207280229103162!2;0.470593272746797;0.172892953555076;0.115202393954877;0.24131137974325!3;0.467126138277054;0.160175127451526;0.227364951088262;0.145333783183157!4;0.196111555801688;0.169855237391659;0.0790678841213435;0.55496532268531!5;0.198275419299105;0.671393451286589;0.0260938644103051;0.104237265004001!6;0.793464816620591;0.0467387666693891;0.110258102130801;0.0495383145792191!7;0.0582035117988556;0.867548608082331;0.0456031654086224;0.0286447147101911!8;0.0794713707368389;0.0274835406428197;0.025248381983932;0.867796706636409!9;0.0322768253685262;0.0658933420330897;0.827417168317375;0.0744126642810091!10;0.0805529840086598;0.119144495234588;0.585049582322154;0.215252938434598!11;0.105105936764887;0.47020770444739;0.170921157292232;0.253765201495491!12;0.690157798204564;0.0339254316104422;0.171120521012061;0.104796249172932!13;0.299542701020779;0.155890259695591;0.362586184257114;0.181980855026516!14;0.343375180937729;0.213359774439731;0.180067190078401;0.263197854544139!15;0.364819370574454;0.14905290640312;0.181128180120945;0.304999542901481!16;0.247817609028364;0.143948239995835;0.217882074778863;0.390352076196938
|entrez_gene_id=79842
|entrez_gene_id=79842
|motif_cluster_2013_march_motif_members= /UNIPROBE:Zbtb3_secondary;SCI09
|motif_cluster_2013_march_motif_members= /UNIPROBE:Zbtb3_secondary;SCI09
|name=known149
|name=non-redundant149
|representative_motif_db=UNIPROBE
|representative_motif_db=UNIPROBE
|representative_motif_id=Zbtb3_secondary
|representative_motif_id=Zbtb3_secondary
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[[Category:Motif]]
[[Category:Motif]]
[[Category:MotifCluster2013March]]
[[Category:MotifCluster2013March]]
[[Category:NonRedundantMotifCluster]]

Latest revision as of 10:22, 30 May 2013

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant149
  • db :UNIPROBE
  • Id :Zbtb3_secondary
  • name :SCI09
  • score :0.06986552910323922
  • External refs:
EntrezGene:79842
UniProt:79842

  • Internal refs:
EntrezGene:79842


Motif matrix
P0ACGT
10.1104118246193120.5199095140210340.1623984322564920.207280229103162
20.4705932727467970.1728929535550760.1152023939548770.24131137974325
30.4671261382770540.1601751274515260.2273649510882620.145333783183157
40.1961115558016880.1698552373916590.07906788412134350.55496532268531
50.1982754192991050.6713934512865890.02609386441030510.104237265004001
60.7934648166205910.04673876666938910.1102581021308010.0495383145792191
70.05820351179885560.8675486080823310.04560316540862240.0286447147101911
80.07947137073683890.02748354064281970.0252483819839320.867796706636409
90.03227682536852620.06589334203308970.8274171683173750.0744126642810091
100.08055298400865980.1191444952345880.5850495823221540.215252938434598
110.1051059367648870.470207704447390.1709211572922320.253765201495491
120.6901577982045640.03392543161044220.1711205210120610.104796249172932
130.2995427010207790.1558902596955910.3625861842571140.181980855026516
140.3433751809377290.2133597744397310.1800671900784010.263197854544139
150.3648193705744540.149052906403120.1811281801209450.304999542901481
160.2478176090283640.1439482399958350.2178820747788630.390352076196938

Sub Motif Members