NonredundantMotifs:115: Difference between revisions
From FANTOM5_SSTAR
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|entrez_gene_id=4150
|motif_cluster_2013_march_motif_members= /SWISSREGULON:GTF2I.p2 /HOCOMOCO:MAZ_f1
|name=known115
|representative_motif_db=HOCOMOCO
|re...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;6.965290806754205;5.045966228893046;12.84709193245778;5.9127579737335685!2;3.343339587242025;4.457786116322679;22.412757973733555;0.5572232645403364!3;7.3058161350844095;0.0;20.24577861163223;3.2195121951219585!4;3.343339587242025;3.033771106941835;24.39399624765473;0.0!5;6.5628517823639525;5.324577861163233;12.69230769230766;6.191369606003755!6;8.667917448405227;0.0;17.64540337711066;4.457786116322679!7;6.748592870544067;6.5628517823639525;17.45966228893055;0.0!8;5.324577861163233;1.1144465290806729;24.332082551594713;0.0!9;0.0;1.6716697936210092;29.099437148217604;0.0!10;22.22701688555344;0.5572232645403364;4.891181988742956;3.095684803001862!11;0.0;0.5572232645403364;30.213883677298256;0.0!12;0.0;1.6097560975609733;27.056285178236347;2.105065666041274!13;7.986866791744818;3.033771106941835;19.750469043151938;0.0!14;15.354596622889275;0.0;12.444652908067528;2.971857410881796!15;6.748592870544067;0.8667917448405227;19.62664165103187;3.5290806754221387!16;0.0;2.2288930581613458;27.427767354596575;1.1144465290806729!17;4.488742964352704;4.736397748592866;20.15290806754219;1.393058161350841 | |||
|entrez_gene_id=4150 | |entrez_gene_id=4150 | ||
|motif_cluster_2013_march_motif_members= /SWISSREGULON:GTF2I. | |motif_cluster_2013_march_motif_members= /HOCOMOCO:MAZ_f1 /SWISSREGULON:GTF2I.p2 | ||
|name= | |name=non-redundant115 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=MAZ_f1 | |representative_motif_id=MAZ_f1 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:21, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant115
- db :HOCOMOCO
- Id :MAZ_f1
- name :
- score :4.35692695345147
- External refs:
- Internal refs:
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Sub Motif Members
