NonredundantMotifs:100: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Known_motif
|entrez_gene_id=6671
|motif_cluster_2013_march_motif_members= /SWISSREGULON:FOXN1.p2 /UNIPROBE:Sp4_secondary;SCI09
|name=known100
|representative_motif_db=...") |
m (Autoedit moved page NonredundantMotifs:Motif100 to NonredundantMotifs:100 without leaving a redirect: NSchange) |
||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.146334023119284;0.312325597002158;0.244280601437075;0.297059778441483!2;0.493155383150446;0.0926092319702565;0.162506333314667;0.25172905156463!3;0.503592857967289;0.0598625691467358;0.0775608807031628;0.358983692182812!4;0.763321236911991;0.0152640847274256;0.213113532750624;0.00830114560995977!5;0.0124152933433829;0.0259324823928593;0.94550161178228;0.0161506124814777!6;0.00671265218803224;0.0152208224592375;0.95009806626886;0.0279684590838698!7;0.0624149295728282;0.834302710434987;0.0545000523171742;0.048782307675011!8;0.011009794281707;0.0206765064998617;0.928820571547922;0.0394931276705095!9;0.0127852825584847;0.0241624261199451;0.145821531650822;0.817230759670749!10;0.133595087758648;0.0339621383800899;0.787876170857959;0.0445666030033028!11;0.140696831265335;0.180480862797504;0.428252547296935;0.250569758640227!12;0.0362805809769257;0.806411569004042;0.0335104472596395;0.123797402759393!13;0.157910409531115;0.408607000263642;0.122427178461432;0.31105541174381!14;0.292185093316507;0.260016972273344;0.197515406696606;0.250282527713542!15;0.251107068488547;0.124479516647001;0.359446652983103;0.264966761881349 | |||
|entrez_gene_id=6671 | |entrez_gene_id=6671 | ||
|motif_cluster_2013_march_motif_members= /SWISSREGULON:FOXN1.p2 /UNIPROBE:Sp4_secondary;SCI09 | |motif_cluster_2013_march_motif_members= /SWISSREGULON:FOXN1.p2 /UNIPROBE:Sp4_secondary;SCI09 | ||
|name= | |name=non-redundant100 | ||
|representative_motif_db=UNIPROBE | |representative_motif_db=UNIPROBE | ||
|representative_motif_id=Sp4_secondary | |representative_motif_id=Sp4_secondary | ||
| Line 11: | Line 12: | ||
[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:21, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant100
- db :UNIPROBE
- Id :Sp4_secondary
- name :SCI09
- score :1.1796062082368315
- External refs:
- Internal refs:
| Motif matrix | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sub Motif Members
