NonredundantMotifs:82: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Known_motif
|entrez_gene_id=7546
|motif_cluster_2013_march_motif_members= /UNIPROBE:Zic2_secondary;SCI09~Zic3_secondary;SCI09~Zic1_secondary;SCI09
|name=known82
|repres...") |
m (Autoedit moved page NonredundantMotifs:Motif82 to NonredundantMotifs:82 without leaving a redirect: NSchange) |
||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.201522193067703;0.336845014678194;0.183740389587064;0.277892402667039!2;0.238704949381827;0.35437843439097;0.165331732062492;0.241584884164711!3;0.350857902047959;0.0314270482030479;0.308481895132862;0.309233154616131!4;0.104423303025766;0.870793514253159;0.0186764661055601;0.00610671661551557!5;0.313245810675351;0.259943593467258;0.277569590891493;0.149241004965898!6;0.00358994195605107;0.973376972945308;0.00252023339521949;0.0205128517034213!7;0.899716096525759;0.0254890794055258;0.015458406194432;0.0593364178742831!8;0.0492243632422561;0.00641470200109169;0.938214277871109;0.00614665688554373!9;0.00202097339489514;0.859631077747346;0.00790298516972887;0.13044496368803!10;0.772817512592719;0.0026585703816194;0.187333717958274;0.0371901990673872!11;0.00845556231047015;0.0151703398091589;0.594694642110373;0.381679455769998!12;0.00411820078878555;0.00918765295047911;0.961505843145346;0.0251883031153892!13;0.36715124244538;0.230955146363652;0.204474960432173;0.197418650758795!14;0.267507905548199;0.19366028579818;0.430069505507387;0.108762303146235!15;0.444448914150772;0.0991274677797265;0.212182302957055;0.244241315112447 | |||
|entrez_gene_id=7546 | |entrez_gene_id=7546 | ||
|motif_cluster_2013_march_motif_members= /UNIPROBE:Zic2_secondary;SCI09~ | |motif_cluster_2013_march_motif_members= /UNIPROBE:Zic2_secondary;SCI09~Zic1_secondary;SCI09~Zic3_secondary;SCI09 | ||
|name= | |name=non-redundant82 | ||
|representative_motif_db=UNIPROBE | |representative_motif_db=UNIPROBE | ||
|representative_motif_id=Zic2_secondary | |representative_motif_id=Zic2_secondary | ||
| Line 11: | Line 12: | ||
[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:21, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant82
- db :UNIPROBE
- Id :Zic2_secondary
- name :SCI09
- score :0.28385848000944897
- External refs:
- Internal refs:
| Motif matrix | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sub Motif Members
