FFCP PHASE1:Hg19::chr6:116782737..116782743,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:116782737..116782743,+
|short_description=p12@FAM26F
|description=CAGE_peak_12_at_FAM26F_5end
|association_with_transcript=-305bp_to_BC146842_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=441168 | |EntrezGene=441168 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=33391 | |HGNC=33391 | ||
|TSSclassifier=strong | |||
|UniProt=B9EJB0 | |UniProt=B9EJB0 | ||
|association_with_transcript=-305bp_to_BC146842_5end | |||
|cluster_id=chr6:116782737..116782743,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_12_at_FAM26F_5end | |||
|id=chr6:116782737..116782743,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.45e-91!42;CL:0000860!4.00e-85!45;CL:0002009!4.32e-61!65;CL:0002194!2.40e-58!63;CL:0000576!2.40e-58!63;CL:0000040!2.40e-58!63;CL:0000559!2.40e-58!63;CL:0000557!1.45e-55!71;CL:0000839!4.33e-52!70;CL:0000766!1.25e-47!76;CL:0000763!1.72e-33!112;CL:0000049!1.72e-33!112;CL:0002087!3.57e-31!119;CL:0002031!9.17e-30!124;CL:0000738!5.82e-28!140;CL:0000037!8.92e-22!172;CL:0000566!8.92e-22!172;CL:0002032!4.36e-21!165;CL:0000837!4.36e-21!165;CL:0000988!2.76e-20!182;CL:0000134!1.33e-07!358;CL:0002320!2.39e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.93e-88;33!CL:0002057;3.93e-88;33!CL:0000473;1.16e-63;39!CL:0000234;1.16e-63;39!CL:0000576;3.66e-44;48!CL:0000766;1.58e-21;69!CL:0000763;1.26e-13;100!CL:0002087;5.58e-12;104!CL:0000738;4.47e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.44e-78,42;CL:0002057,3.44e-78,42;CL:0000473,3.24e-68,48;CL:0000234,3.24e-68,48;CL:0002194,3.04e-54,59;CL:0000576,3.04e-54,59;CL:0000040,3.04e-54,59;CL:0000559,3.04e-54,59;CL:0002009,1.94e-52,61;CL:0000839,2.12e-48,66;CL:0000557,1.16e-47,67;CL:0000766,2.79e-44,72;CL:0000763,4.54e-29,108;CL:0000049,4.54e-29,108;CL:0002087,3.33e-27,115;CL:0002031,5.28e-26,120;CL:0000738,9.52e-23,136;CL:0002032,6.10e-19,161;CL:0000837,6.10e-19,161;CL:0000037,4.47e-18,168;CL:0000988,4.61e-17,177;CL:0000134,1.68e-07,354;CL:0002320,2.59e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;4.91e-60;42!CL:0000049;7.88e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.83e-50!102;UBERON:0003061!5.83e-50!102;UBERON:0002371!8.25e-49!80;UBERON:0001474!4.42e-45!86;UBERON:0002193!4.77e-45!112;UBERON:0002405!9.73e-41!115;UBERON:0004765!1.13e-37!101;UBERON:0001434!1.13e-37!101;UBERON:0002204!9.01e-21!167;UBERON:0003081!9.72e-21!216;UBERON:0002106!2.21e-08!3;UBERON:0004854!2.21e-08!3;UBERON:0009034!2.21e-08!3;UBERON:0002095!2.21e-08!3;UBERON:0004782!2.21e-08!3;UBERON:0003281!2.21e-08!3;UBERON:0009664!2.21e-08!3;UBERON:0002296!2.21e-08!3;UBERON:0005602!2.21e-08!3;UBERON:0001179!2.21e-08!3;UBERON:0006293!2.21e-08!3;UBERON:0000926!9.81e-08!448;UBERON:0004120!9.81e-08!448;UBERON:0006603!9.81e-08!448;UBERON:0004177!1.01e-07!7;UBERON:0002363!4.34e-07!1;UBERON:0007647!4.34e-07!1;UBERON:0010115!4.34e-07!1;UBERON:0002384!5.29e-07!375;UBERON:0002336!6.57e-07!1;UBERON:0001018!6.57e-07!1;UBERON:0002473!6.57e-07!1;UBERON:0005340!6.57e-07!1;UBERON:0002316!6.57e-07!1;UBERON:0003544!6.57e-07!1;UBERON:0001020!6.57e-07!1;UBERON:0005970!6.57e-07!1;UBERON:0002437!6.57e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.85e-42,76;UBERON:0001474,9.77e-39,82;UBERON:0004765,3.55e-35,90;UBERON:0002405,5.37e-34,93;UBERON:0002390,3.45e-32,98;UBERON:0003061,3.45e-32,98;UBERON:0001434,1.63e-31,100;UBERON:0002193,4.54e-29,108;UBERON:0002204,3.40e-18,167;UBERON:0003081,1.24e-14,203;UBERON:0000926,1.06e-08,315;UBERON:0004120,1.06e-08,315;UBERON:0006603,1.06e-08,315;UBERON:0002384,4.69e-07,371 | |||
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|short_description=p12@FAM26F | |||
}} | }} |
Latest revision as of 01:05, 20 September 2015
Short description: | p12@FAM26F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_FAM26F_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -305bp_to_BC146842_5end |
EntrezGene: | FAM26F |
HGNC: | 33391 |
UniProt: | B9EJB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.44e-78 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.44e-78 | 42 |
defensive cell | 3.24e-68 | 48 |
phagocyte | 3.24e-68 | 48 |
monopoietic cell | 3.04e-54 | 59 |
monocyte | 3.04e-54 | 59 |
monoblast | 3.04e-54 | 59 |
promonocyte | 3.04e-54 | 59 |
macrophage dendritic cell progenitor | 1.94e-52 | 61 |
myeloid lineage restricted progenitor cell | 2.12e-48 | 66 |
granulocyte monocyte progenitor cell | 1.16e-47 | 67 |
myeloid leukocyte | 2.79e-44 | 72 |
myeloid cell | 4.54e-29 | 108 |
common myeloid progenitor | 4.54e-29 | 108 |
nongranular leukocyte | 3.33e-27 | 115 |
hematopoietic lineage restricted progenitor cell | 5.28e-26 | 120 |
leukocyte | 9.52e-23 | 136 |
hematopoietic oligopotent progenitor cell | 6.10e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.10e-19 | 161 |
hematopoietic stem cell | 4.47e-18 | 168 |
hematopoietic cell | 4.61e-17 | 177 |
mesenchymal cell | 1.68e-07 | 354 |
connective tissue cell | 2.59e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.85e-42 | 76 |
bone element | 9.77e-39 | 82 |
skeletal element | 3.55e-35 | 90 |
immune system | 5.37e-34 | 93 |
hematopoietic system | 3.45e-32 | 98 |
blood island | 3.45e-32 | 98 |
skeletal system | 1.63e-31 | 100 |
hemolymphoid system | 4.54e-29 | 108 |
musculoskeletal system | 3.40e-18 | 167 |
lateral plate mesoderm | 1.24e-14 | 203 |
mesoderm | 1.06e-08 | 315 |
mesoderm-derived structure | 1.06e-08 | 315 |
presumptive mesoderm | 1.06e-08 | 315 |
connective tissue | 4.69e-07 | 371 |