FFCP PHASE1:Hg19::chr6:109703663..109703681,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:109703663..109703681,-
|short_description=p2@CD164
|description=CAGE_peak_2_at_CD164_5end
|association_with_transcript=-3bp_to_ENST00000413644_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8763 | |EntrezGene=8763 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1632 | |HGNC=1632 | ||
|TSSclassifier=strong | |||
|UniProt=Q04900 | |UniProt=Q04900 | ||
|association_with_transcript=-3bp_to_ENST00000413644_5end | |||
|cluster_id=chr6:109703663..109703681,- | |||
|description=CAGE_peak_2_at_CD164_5end | |||
|id=chr6:109703663..109703681,- | |||
|ontology_enrichment_celltype=CL:0002194!8.81e-18!63;CL:0000576!8.81e-18!63;CL:0000040!8.81e-18!63;CL:0000559!8.81e-18!63;CL:0002009!3.36e-17!65;CL:0002320!2.14e-16!365;CL:0000766!3.40e-16!76;CL:0000557!5.39e-16!71;CL:0000839!7.51e-16!70;CL:0000134!9.17e-16!358;CL:0000048!1.93e-12!430;CL:0002057!2.89e-12!42;CL:0000723!4.28e-11!436;CL:0000763!6.10e-11!112;CL:0000049!6.10e-11!112;CL:0000034!8.30e-11!444;CL:0000860!2.14e-10!45;CL:0000219!2.29e-10!390;CL:0002087!9.67e-08!119;CL:0002031!2.80e-07!124;CL:0000738!6.79e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.96e-14;39!CL:0000234;2.96e-14;39!CL:0000860;2.26e-13;33!CL:0002057;2.26e-13;33!CL:0000576;1.29e-09;48!CL:0000766;4.84e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.04e-19,59;CL:0000576,2.04e-19,59;CL:0000040,2.04e-19,59;CL:0000559,2.04e-19,59;CL:0002009,9.60e-19,61;CL:0000766,1.80e-17,72;CL:0002320,2.08e-17,361;CL:0000557,2.46e-17,67;CL:0000839,3.37e-17,66;CL:0000134,9.22e-17,354;CL:0000473,9.30e-16,48;CL:0000234,9.30e-16,48;CL:0000048,1.30e-13,427;CL:0000860,2.89e-12,42;CL:0002057,2.89e-12,42;CL:0000723,3.43e-12,433;CL:0000034,6.94e-12,441;CL:0000763,1.32e-11,108;CL:0000049,1.32e-11,108;CL:0000219,3.98e-11,386;CL:0002087,3.22e-08,115;CL:0002031,1.02e-07,120;CL:0000738,2.80e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;3.16e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.01e-16!375;UBERON:0002371!1.80e-15!80;UBERON:0004765!4.49e-15!101;UBERON:0001434!4.49e-15!101;UBERON:0001474!2.29e-14!86;UBERON:0002405!6.15e-13!115;UBERON:0002204!2.48e-12!167;UBERON:0002390!5.25e-12!102;UBERON:0003061!5.25e-12!102;UBERON:0002193!6.48e-10!112;UBERON:0000926!4.30e-09!448;UBERON:0004120!4.30e-09!448;UBERON:0006603!4.30e-09!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.77e-18,371;UBERON:0001434,5.35e-17,100;UBERON:0002371,1.20e-16,76;UBERON:0004765,1.36e-16,90;UBERON:0001474,2.10e-15,82;UBERON:0002204,4.33e-14,167;UBERON:0002390,8.81e-13,98;UBERON:0003061,8.81e-13,98;UBERON:0002405,1.57e-12,93;UBERON:0002193,1.58e-10,108;UBERON:0000926,3.11e-07,315;UBERON:0004120,3.11e-07,315;UBERON:0006603,3.11e-07,315 | |||
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| ||
|short_description=p2@CD164 | |||
}} | }} |
Latest revision as of 18:28, 19 September 2015
Short description: | p2@CD164 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CD164_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000413644_5end |
EntrezGene: | CD164 |
HGNC: | 1632 |
UniProt: | Q04900 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.04e-19 | 59 |
monocyte | 2.04e-19 | 59 |
monoblast | 2.04e-19 | 59 |
promonocyte | 2.04e-19 | 59 |
macrophage dendritic cell progenitor | 9.60e-19 | 61 |
myeloid leukocyte | 1.80e-17 | 72 |
connective tissue cell | 2.08e-17 | 361 |
granulocyte monocyte progenitor cell | 2.46e-17 | 67 |
myeloid lineage restricted progenitor cell | 3.37e-17 | 66 |
mesenchymal cell | 9.22e-17 | 354 |
defensive cell | 9.30e-16 | 48 |
phagocyte | 9.30e-16 | 48 |
multi fate stem cell | 1.30e-13 | 427 |
classical monocyte | 2.89e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.89e-12 | 42 |
somatic stem cell | 3.43e-12 | 433 |
stem cell | 6.94e-12 | 441 |
myeloid cell | 1.32e-11 | 108 |
common myeloid progenitor | 1.32e-11 | 108 |
motile cell | 3.98e-11 | 386 |
nongranular leukocyte | 3.22e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.02e-07 | 120 |
leukocyte | 2.80e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.77e-18 | 371 |
skeletal system | 5.35e-17 | 100 |
bone marrow | 1.20e-16 | 76 |
skeletal element | 1.36e-16 | 90 |
bone element | 2.10e-15 | 82 |
musculoskeletal system | 4.33e-14 | 167 |
hematopoietic system | 8.81e-13 | 98 |
blood island | 8.81e-13 | 98 |
immune system | 1.57e-12 | 93 |
hemolymphoid system | 1.58e-10 | 108 |
mesoderm | 3.11e-07 | 315 |
mesoderm-derived structure | 3.11e-07 | 315 |
presumptive mesoderm | 3.11e-07 | 315 |