FFCP PHASE1:Hg19::chr6:106546731..106546755,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:106546731..106546755,+
|short_description=p5@PRDM1
|description=CAGE_peak_5_at_PRDM1_5end
|association_with_transcript=0bp_to_NM_182907_5end
|EntrezGene=6...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=639 | |EntrezGene=639 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9346 | |HGNC=9346 | ||
|TSSclassifier=strong | |||
|UniProt=Q86WM7 | |UniProt=Q86WM7 | ||
|association_with_transcript=0bp_to_NM_182907_5end | |||
|cluster_id=chr6:106546731..106546755,+ | |||
|coexpression_cluster_id=C1199 | |||
|description=CAGE_peak_5_at_PRDM1_5end | |||
|id=chr6:106546731..106546755,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.85e-15!18;CL:0000789!3.85e-15!18;CL:0002420!3.85e-15!18;CL:0002419!3.85e-15!18;CL:0000790!3.85e-15!18;CL:0000838!2.09e-14!52;CL:0000542!7.91e-14!53;CL:0000051!7.91e-14!53;CL:0000084!1.42e-13!25;CL:0000827!1.42e-13!25;CL:0000625!2.40e-10!11;CL:0002087!1.22e-09!119;CL:0000738!2.14e-08!140 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.53e-27;18!CL:0000789;2.53e-27;18!CL:0002419;2.53e-27;18!CL:0000084;2.74e-25;25!CL:0000625;8.48e-20;11!CL:0000542;8.74e-12;53!CL:0000624;5.97e-08;6!CL:0000623;4.50e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.56e-27,18;CL:0000789,2.56e-27,18;CL:0002420,2.56e-27,18;CL:0002419,2.56e-27,18;CL:0000790,2.56e-27,18;CL:0000084,2.00e-25,25;CL:0000827,2.00e-25,25;CL:0000838,4.54e-24,52;CL:0000542,1.98e-23,53;CL:0000051,1.98e-23,53;CL:0000625,8.07e-20,11;CL:0002087,4.51e-14,115;CL:0000738,2.43e-13,136;CL:0002031,2.38e-10,120;CL:0000988,7.14e-10,177;CL:0000037,4.17e-09,168;CL:0002032,5.71e-08,161;CL:0000837,5.71e-08,161;CL:0000624,6.50e-08,6;CL:0000623,4.56e-07,3;CL:0000825,4.56e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.53e-27;18!CL:0000051;8.74e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.68e-17!115;UBERON:0000178!1.31e-12!15;UBERON:0000179!1.31e-12!15;UBERON:0000463!1.31e-12!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.56e-24;15!UBERON:0000179;3.56e-24;15!UBERON:0000463;3.56e-24;15!UBERON:0002390;1.08e-14;32!UBERON:0002193;3.34e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.56e-24,15;UBERON:0000179,1.56e-24,15;UBERON:0000463,1.56e-24,15 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,4.12632391038937,5.99334302984604,6.76912719297642,1.57345710739562,11.8987113410136,2.32224184974114,0,0.6024118375565,4.80680213216824,0.154934401160603,0,0,2.76997704265939,2.00544447470142,1.73608696572681,0.447830948479849,0.971680998056939,1.28787783817093,0,0.377875943688809,0,0,0.411167888021826,0,0.863077176966451,0.512321413058201,0.236482229888585,1.03423704220986,0.645484683583826,0,0,0.818718450173537,0,0.306083892370903,0,0,0,0.398927315243264,0.426224750532694,0,0,0,0.75374599577023,1.0429658368404,2.17188844705117,0.605399502633369,0.736555271975129,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0.426730222566507,0,0,0,0.954053754535364,0,0,1.14681968437569,0,2.80254281490768,0,4.13090517239049,5.10913991573914,6.16804496998528,14.545225098989,0.651844533267181,2.36723902867367,0,9.02424700769906,12.668054021418,13.7351014641845,21.1227013736712,9.60684897942564,6.11278933531428,2.79544437826249,2.48715016007264,2.60822777161547,0.889719378972363,0.802622484269139,1.04535523804977,5.09892042139048,7.2811893784365,8.24705869158312,9.86776798876061,6.37130828648194,3.25541726928209,5.70271226669025,11.4437090499107,18.5580586173907,9.99445812418767,10.6549763419808,11.4957919568947,8.87069670188823,6.68600489458768,6.37227377084316,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.327447688744282,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.71153252537342,0.33472061276467,0.402829317109147,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0.436094052142534,0.496971951695318,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.847727604638247,0,0.412210116953756,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0,0,0.272746120590835,0.286804595389004,0.365921118388786,0.132529768321485,0,0.518305275076852,0,0,0,0,1.38134921352481,0,0,0.591534000199219,0.505754070234305,0.964044119533928,0.55146986366197,0.653638332277218,0,0.134831308160164,0.588664395376038,0,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0.122988438543114,0,0.329250856225877,0,0.402115889646523,1.75918045801206,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,3.6988097517864,16.35355309676,12.506399341852,15.9145364986888,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0.195801157462741,0,9.9248652538986,3.8828556147351,7.04401881502733,0,0,0,0.248107807818777,0,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0.164254312027618,0.519254429183621,0,0,0.40101294060657,3.40699659062816,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,1.15699440752685,0.192190067365106,0.765676274967505,1.8208400553999,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0,0,0,0,0.731140468893853,0,0.272999822815972,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,1.63577591633371,0.670302275535787,1.08890984861323,0.376575203107117,2.15252686335615,1.68471475667626,0.886860307073351,1.1486170010348,5.58192370155386,4.58782324285425,2.84823593587081,9.76750279376935,6.9931586424653,7.78167973431261,6.48037724685738,6.34500141035416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,1.75809815126273,0,0.111443384277478,0,0,0,0,0,0,0,1.81284261649436,0.211125408127993,1.19548792950642,1.93398740871803,0,0,2.58478091468246,0,0.359473404589307,0,0,1.38100767891707,9.57932369387759,0,0,0.649376687132959,0,0,0,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.331737779793674,0,0.438770794307945,0,0.697118721393016,0.769502585037971,0,0,0,0,0,1.19076871422421,0,0,0,0,0.225595660617181,0.588187602953219,1.00692952185506,0,0,0,0,0,0,0,2.0345239835768,0,5.93042257361244,1.85345908419754,1.8795950910982,0.202203398942031,0,0.234264445725339,0.182454789215666,0.19566461893209,0,0,1.20990716048664,0,2.46427660551103,0,0.207376382794494,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0.146178634172371,0.0821154570532092,1.06687918137261,0,0,0,0,0.126621591911757,0.195551382734803,0,2.56143593687223,0,1.00863292007874,0,0,0,0.124252535565433,0.942776138467182,0,0,0,0,0,0.547621515567972,0,0,2.89176089707246,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.268733889946905,0,0,0,0,0,0.0984274815147488,0.169346664131569,0,0.953423842781029,0,0.412618309791701,0.415440338029185,0,0,0.121499113316049,0,0.945668487590378,0.0524545881349981,0,0.17928733933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| ||
|short_description=p5@PRDM1 | |||
}} | }} |
Latest revision as of 15:00, 19 September 2015
Short description: | p5@PRDM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRDM1_5end |
Coexpression cluster: | C1199_CD4_Natural_CD8_Basophils_Peripheral_mycosis_cord |
Association with transcript: | 0bp_to_NM_182907_5end |
EntrezGene: | PRDM1 |
HGNC: | 9346 |
UniProt: | Q86WM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.56e-27 | 18 |
alpha-beta T cell | 2.56e-27 | 18 |
immature T cell | 2.56e-27 | 18 |
mature T cell | 2.56e-27 | 18 |
immature alpha-beta T cell | 2.56e-27 | 18 |
T cell | 2.00e-25 | 25 |
pro-T cell | 2.00e-25 | 25 |
lymphoid lineage restricted progenitor cell | 4.54e-24 | 52 |
lymphocyte | 1.98e-23 | 53 |
common lymphoid progenitor | 1.98e-23 | 53 |
CD8-positive, alpha-beta T cell | 8.07e-20 | 11 |
nongranular leukocyte | 4.51e-14 | 115 |
leukocyte | 2.43e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 2.38e-10 | 120 |
hematopoietic cell | 7.14e-10 | 177 |
hematopoietic stem cell | 4.17e-09 | 168 |
hematopoietic oligopotent progenitor cell | 5.71e-08 | 161 |
hematopoietic multipotent progenitor cell | 5.71e-08 | 161 |
CD4-positive, alpha-beta T cell | 6.50e-08 | 6 |
natural killer cell | 4.56e-07 | 3 |
pro-NK cell | 4.56e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.56e-24 | 15 |
haemolymphatic fluid | 1.56e-24 | 15 |
organism substance | 1.56e-24 | 15 |