UBERON:0001678: Difference between revisions
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|has_quality= | |has_quality= | ||
|id=UBERON:0001678 | |id=UBERON:0001678 | ||
|is_a=UBERON: | |is_a=UBERON:0003462 ;;UBERON:0008193 ;;UBERON:0015212 | ||
|is_obsolete= | |is_obsolete= | ||
|located_in= | |located_in= | ||
|name=temporal bone | |name=temporal bone | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0004339 | |part_of=UBERON:0004339 | ||
Latest revision as of 17:19, 12 September 2014
| Name: | temporal bone | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The temporal bones are situated at the sides and base of the skull, and lateral to the temporal lobes of the cerebrum." [Wikipedia:Temporal_bone] | ||
| Xrefs: |
| ||
| Synonyms: | "os temporale" RELATED LATIN [Wikipedia:Temporal_bone] | ||
| Comments: | The temporal bone consists of four parts: * Squama temporalis * Mastoid portion * Petrous portion (Petrosal ridge) * Tympanic part[WP]. AO notes: Note the Temporal bone is not explicitly categorized to a part of the cranium in FMA. Taxon notes: fusion of squamosal + angular (tympanic annulus) [derm] + petrosal (prootic + opisthotic)[chond] + styloid process[splanc.] | ||
| Alt_id: | UBERON:FMA_52737-MA_0001476 | ||
| Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003462(facial bone),UBERON:0008193(pneumatized bone),UBERON:0015212(lateral structure) |
|---|---|
| part_of: | UBERON:0004339(calvarium) |
Children
| part of: | UBERON:0001694 (petrous part of temporal bone) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001678 (temporal bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr5:144115382..144115389, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr2:73232344..73232356, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:172843885..172843890, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr7:139597684..139597691, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Tmc1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr17:13983179..13983190, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr3:154459184..154459195, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_329b6ed7138a6c61a2ec9877f02c3792 | p3@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_329b6ed7138a6c61a2ec9877f02c3792 | p3@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:89215333..89215341, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr7:133957514..133957529, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:172843813..172843834, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr5:72652660..72652667, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr16:93971367..93971379, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_329b6ed7138a6c61a2ec9877f02c3792 | p9@Ankrd24 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr17:13983198..13983203, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_329b6ed7138a6c61a2ec9877f02c3792 | p3@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Otog |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr13:43699188..43699216, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr9:42207375..42207384, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:55256373..55256384,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr19:55256373..55256384, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_329b6ed7138a6c61a2ec9877f02c3792 | p2@Strc |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:60561636..60561645,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:60561636..60561645, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:182528371..182528385, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr7:141605556..141605563, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_329b6ed7138a6c61a2ec9877f02c3792 | p7@Glt25d2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr14:102297747..102297765, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr5:144115382..144115389, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_329b6ed7138a6c61a2ec9877f02c3792 | p9@Otof |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr13:58283583..58283607, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr9:42207375..42207384, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93235253..93235264,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:93235253..93235264, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr11:4689837..4689845, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:94180607..94180619,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr8:94180607..94180619, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_329b6ed7138a6c61a2ec9877f02c3792 | p3@Tmprss3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr3:154459231..154459240, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107156949..107156956,-#_329b6ed7138a6c61a2ec9877f02c3792 | p3@Ptprq |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_329b6ed7138a6c61a2ec9877f02c3792 | p4@uc007rhb.1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr18:38104702..38104718, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr17:27252925..27252939, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr7:141605556..141605563, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:194818647..194818660, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr12:13572961..13572974, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:22767090..22767099,+#_329b6ed7138a6c61a2ec9877f02c3792 | p18@Trpm3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:102297747..102297765,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr14:102297747..102297765, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:65641741..65641748,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:65641741..65641748, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:139597684..139597691,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr7:139597684..139597691, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_329b6ed7138a6c61a2ec9877f02c3792 | p41@Cacnb2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_329b6ed7138a6c61a2ec9877f02c3792 | p6@Jag1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:109052297..109052300,-#_329b6ed7138a6c61a2ec9877f02c3792 | p2@Tomt |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_329b6ed7138a6c61a2ec9877f02c3792 | p2@Otof |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:37195838..37195870,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr13:37195838..37195870, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:103146966..103146971,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:103146966..103146971, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr6:113251570..113251578, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:27964761..27964768,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr7:27964761..27964768, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_329b6ed7138a6c61a2ec9877f02c3792 | p2@9230102O04Rik |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr13:43699188..43699216, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:94371127..94371139,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr11:94371127..94371139, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr8:13414289..13414295, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Tectb |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr13:78257491..78257498, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:89215319..89215330,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:89215319..89215330, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr16:93971367..93971379, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:16651649..16651655, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_329b6ed7138a6c61a2ec9877f02c3792 | p3@Ptprq |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_329b6ed7138a6c61a2ec9877f02c3792 | p3@Gipc3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:29428397..29428407,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr6:29428397..29428407, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_329b6ed7138a6c61a2ec9877f02c3792 | p4@Kncn |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983095..13983100,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr17:13983095..13983100, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:75320183..75320189,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr2:75320183..75320189, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Espnl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:94627290..94627299,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:94627290..94627299, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:109905468..109905474,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr12:109905468..109905474, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_329b6ed7138a6c61a2ec9877f02c3792 | p2@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr11:75421384..75421397, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr7:29733825..29733837, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Otol1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_329b6ed7138a6c61a2ec9877f02c3792 | p18@Trpm3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr18:81314626..81314636, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr2:75320183..75320189, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:60561636..60561645, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_329b6ed7138a6c61a2ec9877f02c3792 | p13@Tsga14 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_329b6ed7138a6c61a2ec9877f02c3792 | p4@BC030867 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr6:113251606..113251613, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr2:170417150..170417155, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:65641779..65641790, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr18:66033526..66033539, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr14:31283085..31283097, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Otol1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_329b6ed7138a6c61a2ec9877f02c3792 | p12@B3galt5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr12:13508015..13508019, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Tmprss7 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr17:13983198..13983203, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:12848147..12848162, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr13:48087761..48087775, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr3:154459231..154459240, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Gm1322 |
