FFCP PHASE1:Hg19::chr5:95053358..95053363,+: Difference between revisions
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|id=chr5:95053358..95053363,+
|short_description=p39@RHOBTB3
|description=CAGE_peak_39_at_RHOBTB3_5end
|association_with_transcript=21bp_to_ENST00000504949,uc003klk...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22836 | |EntrezGene=22836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18757 | |HGNC=18757 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENST00000504949,uc003klk.1_5end | |||
|cluster_id=chr5:95053358..95053363,+ | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_39_at_RHOBTB3_5end | |||
|id=chr5:95053358..95053363,+ | |||
|ontology_enrichment_celltype=CL:0002594!6.84e-13!4;CL:0002589!4.17e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002594;7.14e-26;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,7.14e-26,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;9.37e-99;1!UBERON:0004872;1.65e-15;7!UBERON:0005795;2.73e-11;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001310!6.84e-13!4;UBERON:0003124!1.06e-07!7;UBERON:0001529!4.17e-07!2;UBERON:0007204!4.17e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;5.56e-26;4!UBERON:0001310;7.14e-26;4!UBERON:0010260;2.45e-12;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,5.56e-26,4;UBERON:0004340,5.56e-26,4;UBERON:0001310,7.14e-26,4;UBERON:0003124,1.65e-15,7;UBERON:0010260,2.45e-12,9;UBERON:0005631,1.86e-08,14;UBERON:0000158,1.86e-08,14 | |||
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|short_description=p39@RHOBTB3 | |||
}} | }} |
Latest revision as of 07:41, 19 September 2015
Short description: | p39@RHOBTB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_RHOBTB3_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 21bp_to_ENST00000504949, uc003klk.1_5end |
EntrezGene: | RHOBTB3 |
HGNC: | 18757 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 7.14e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
placenta | 5.56e-26 | 4 |
allantois | 5.56e-26 | 4 |
umbilical artery | 7.14e-26 | 4 |
chorion | 1.65e-15 | 7 |
umbilical blood vessel | 2.45e-12 | 9 |
extraembryonic membrane | 1.86e-08 | 14 |
membranous layer | 1.86e-08 | 14 |