FFCP PHASE1:Hg19::chr5:90666815..90666826,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:90666815..90666826,-
|short_description=p2@ARRDC3
|description=CAGE_peak_2_at_ARRDC3_5end
|association_with_transcript=181bp_to_AK026917_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57561 | |EntrezGene=57561 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=29263 | |HGNC=29263 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=181bp_to_AK026917_5end | |||
|cluster_id=chr5:90666815..90666826,- | |||
|coexpression_cluster_id=C4528 | |||
|description=CAGE_peak_2_at_ARRDC3_5end | |||
|id=chr5:90666815..90666826,- | |||
|ontology_enrichment_celltype=CL:0000738!2.37e-18!140;CL:0002057!1.69e-16!42;CL:0002031!3.28e-16!124;CL:0000766!4.98e-16!76;CL:0002087!1.60e-15!119;CL:0000860!2.50e-15!45;CL:0000839!8.65e-14!70;CL:0000557!2.58e-13!71;CL:0002009!2.81e-13!65;CL:0002194!4.74e-13!63;CL:0000576!4.74e-13!63;CL:0000040!4.74e-13!63;CL:0000559!4.74e-13!63;CL:0002032!1.07e-10!165;CL:0000837!1.07e-10!165;CL:0000037!4.23e-10!172;CL:0000566!4.23e-10!172;CL:0000988!9.47e-08!182;CL:0000763!2.20e-07!112;CL:0000049!2.20e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.96e-11;33!CL:0002057;1.96e-11;33!CL:0000576;6.09e-11;48!CL:0000473;4.27e-10;39!CL:0000234;4.27e-10;39!CL:0000766;5.37e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.22e-19,136;CL:0000473,6.67e-17,48;CL:0000234,6.67e-17,48;CL:0000766,6.71e-17,72;CL:0002031,9.34e-17,120;CL:0000860,1.60e-16,42;CL:0002057,1.60e-16,42;CL:0002087,4.56e-16,115;CL:0000839,1.34e-14,66;CL:0002009,4.06e-14,61;CL:0000557,4.37e-14,67;CL:0002194,6.67e-14,59;CL:0000576,6.67e-14,59;CL:0000040,6.67e-14,59;CL:0000559,6.67e-14,59;CL:0002032,4.55e-11,161;CL:0000837,4.55e-11,161;CL:0000037,2.00e-10,168;CL:0000988,2.63e-08,177;CL:0000763,9.57e-08,108;CL:0000049,9.57e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;4.15e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.18e-13!102;UBERON:0003061!1.18e-13!102;UBERON:0002193!6.40e-13!112;UBERON:0002371!1.35e-11!80;UBERON:0001474!8.62e-10!86;UBERON:0004765!2.67e-08!101;UBERON:0001434!2.67e-08!101;UBERON:0002405!4.57e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.44e-14,98;UBERON:0003061,3.44e-14,98;UBERON:0002193,1.82e-13,108;UBERON:0002371,3.58e-12,76;UBERON:0002405,2.03e-10,93;UBERON:0001474,3.19e-10,82;UBERON:0004765,1.45e-09,90;UBERON:0001434,5.62e-09,100 | |||
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| ||
|short_description=p2@ARRDC3 | |||
}} | }} |
Latest revision as of 05:07, 19 September 2015
Short description: | p2@ARRDC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARRDC3_5end |
Coexpression cluster: | C4528_Neutrophils_renal_lung_blood_CD4_chorionic_Mast |
Association with transcript: | 181bp_to_AK026917_5end |
EntrezGene: | ARRDC3 |
HGNC: | 29263 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.22e-19 | 136 |
defensive cell | 6.67e-17 | 48 |
phagocyte | 6.67e-17 | 48 |
myeloid leukocyte | 6.71e-17 | 72 |
hematopoietic lineage restricted progenitor cell | 9.34e-17 | 120 |
classical monocyte | 1.60e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.60e-16 | 42 |
nongranular leukocyte | 4.56e-16 | 115 |
myeloid lineage restricted progenitor cell | 1.34e-14 | 66 |
macrophage dendritic cell progenitor | 4.06e-14 | 61 |
granulocyte monocyte progenitor cell | 4.37e-14 | 67 |
monopoietic cell | 6.67e-14 | 59 |
monocyte | 6.67e-14 | 59 |
monoblast | 6.67e-14 | 59 |
promonocyte | 6.67e-14 | 59 |
hematopoietic oligopotent progenitor cell | 4.55e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.55e-11 | 161 |
hematopoietic stem cell | 2.00e-10 | 168 |
hematopoietic cell | 2.63e-08 | 177 |
myeloid cell | 9.57e-08 | 108 |
common myeloid progenitor | 9.57e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.44e-14 | 98 |
blood island | 3.44e-14 | 98 |
hemolymphoid system | 1.82e-13 | 108 |
bone marrow | 3.58e-12 | 76 |
immune system | 2.03e-10 | 93 |
bone element | 3.19e-10 | 82 |
skeletal element | 1.45e-09 | 90 |
skeletal system | 5.62e-09 | 100 |