FFCP PHASE1:Hg19::chr5:83680211..83680254,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:83680211..83680254,-
|short_description=p3@EDIL3
|description=CAGE_peak_3_at_EDIL3_5end
|association_with_transcript=-7bp_to_ENST00000380138_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10085 | |EntrezGene=10085 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3173 | |HGNC=3173 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000380138_5end | |||
|cluster_id=chr5:83680211..83680254,- | |||
|coexpression_cluster_id=C2831 | |||
|description=CAGE_peak_3_at_EDIL3_5end | |||
|id=chr5:83680211..83680254,- | |||
|ontology_enrichment_celltype=CL:0000055!3.29e-32!180;CL:0000359!2.72e-14!32;CL:0000393!1.34e-13!60;CL:0000211!1.34e-13!60;CL:0000680!2.31e-13!57;CL:0000056!2.31e-13!57;CL:0000355!2.31e-13!57;CL:0000187!2.15e-12!54;CL:0000192!2.97e-12!42;CL:0000514!2.97e-12!42;CL:0000183!1.14e-11!59;CL:0000057!2.44e-10!75;CL:0000222!9.72e-09!119;CL:0002321!2.09e-07!248;CL:0000220!5.73e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.57e-14;32!CL:0000192;1.62e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.20e-15,32;CL:0000393,7.02e-13,61;CL:0000211,7.02e-13,61;CL:0000680,1.35e-12,58;CL:0000056,1.35e-12,58;CL:0000355,1.35e-12,58;CL:0000192,7.43e-12,43;CL:0000514,7.43e-12,43;CL:0000187,1.39e-11,55;CL:0000057,1.71e-09,76 | |||
|ontology_enrichment_development_v019=CL:0000514;1.62e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.36e-17!365;UBERON:0000481!2.41e-15!347;UBERON:0000477!1.84e-13!286;UBERON:0000468!6.91e-13!659;UBERON:0000914!7.67e-13!83;UBERON:0002329!7.67e-13!83;UBERON:0003077!7.67e-13!83;UBERON:0003059!7.67e-13!83;UBERON:0007282!7.67e-13!83;UBERON:0009618!7.67e-13!83;UBERON:0007285!7.67e-13!83;UBERON:0001134!8.64e-12!61;UBERON:0002036!8.64e-12!61;UBERON:0003082!8.64e-12!61;UBERON:0002385!1.19e-11!63;UBERON:0001015!1.19e-11!63;UBERON:0000383!1.19e-11!63;UBERON:0000025!2.77e-11!194;UBERON:0004290!9.02e-11!70;UBERON:0005256!9.27e-11!143;UBERON:0004872!2.52e-10!84;UBERON:0001637!1.03e-09!42;UBERON:0003509!1.03e-09!42;UBERON:0004572!1.03e-09!42;UBERON:0000119!2.17e-09!312;UBERON:0003914!2.88e-09!118;UBERON:0000483!3.31e-09!309;UBERON:0004111!3.38e-09!241;UBERON:0005743!3.55e-09!86;UBERON:0001017!5.70e-09!82;UBERON:0000073!7.10e-09!94;UBERON:0001016!7.10e-09!94;UBERON:0000467!1.56e-08!625;UBERON:0004573!1.65e-08!33;UBERON:0004571!1.65e-08!33;UBERON:0000480!1.78e-08!626;UBERON:0002049!2.68e-08!79;UBERON:0007798!2.68e-08!79;UBERON:0000922!3.66e-08!612;UBERON:0001981!3.83e-08!60;UBERON:0007500!3.83e-08!60;UBERON:0004537!3.83e-08!60;UBERON:0006965!3.83e-08!60;UBERON:0002100!4.84e-08!216;UBERON:0000033!1.11e-07!123;UBERON:0004121!1.79e-07!169;UBERON:0004535!2.90e-07!110;UBERON:0000955!2.93e-07!69;UBERON:0006238!2.93e-07!69;UBERON:0000924!3.03e-07!173;UBERON:0006601!3.03e-07!173;UBERON:0001009!3.51e-07!113;UBERON:0000486!3.88e-07!82;UBERON:0003104!5.39e-07!238;UBERON:0009142!5.39e-07!238;UBERON:0002050!8.75e-07!605;UBERON:0005423!8.75e-07!605;UBERON:0000923!9.16e-07!604;UBERON:0005291!9.16e-07!604;UBERON:0006598!9.16e-07!604;UBERON:0002532!9.16e-07!604;UBERON:0000153!9.91e-07!129;UBERON:0007811!9.91e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.09e-08;33!UBERON:0004571;5.09e-08;33 | |||
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| ||
|short_description=p3@EDIL3 | |||
}} | }} |
Latest revision as of 01:20, 19 September 2015
Short description: | p3@EDIL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EDIL3_5end |
Coexpression cluster: | C2831_Smooth_Fibroblast_cholangiocellular_osteoclastoma_basal_spindle_Ewing |
Association with transcript: | -7bp_to_ENST00000380138_5end |
EntrezGene: | EDIL3 |
HGNC: | 3173 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.20e-15 | 32 |
electrically responsive cell | 7.02e-13 | 61 |
electrically active cell | 7.02e-13 | 61 |
muscle precursor cell | 1.35e-12 | 58 |
myoblast | 1.35e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.35e-12 | 58 |
smooth muscle cell | 7.43e-12 | 43 |
smooth muscle myoblast | 7.43e-12 | 43 |
muscle cell | 1.39e-11 | 55 |
fibroblast | 1.71e-09 | 76 |