FFCP PHASE1:Hg19::chr5:80255192..80255201,+: Difference between revisions
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|id=chr5:80255192..80255201,+
|short_description=p@chr5:80255192..80255201,+
|description=CAGE_peak_at_chr5:80255192..80255201,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:80255192..80255201,+ | |||
|coexpression_cluster_id=C981 | |||
|description=CAGE_peak_at_chr5:80255192..80255201,+ | |||
|id=chr5:80255192..80255201,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.98e-12!5;CL:0000540!8.86e-11!6;CL:0000031!8.86e-11!6;CL:0000404!8.86e-11!6;CL:0002541!3.84e-10!3;CL:0000039!4.86e-09!7;CL:0000586!4.86e-09!7;CL:0000047!3.40e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002541;5.04e-34;3!CL:0000039;1.78e-15;7!CL:0000586;1.78e-15;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.27e-34,3;CL:0000039,1.91e-15,7;CL:0000586,1.91e-15,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!2.79e-23!20;UBERON:0001869!1.72e-21!32;UBERON:0002619!3.90e-21!22;UBERON:0001893!3.76e-20!34;UBERON:0000956!1.55e-18!25;UBERON:0000203!1.55e-18!25;UBERON:0002791!3.81e-17!33;UBERON:0002020!1.32e-16!34;UBERON:0003528!1.32e-16!34;UBERON:0002780!1.83e-16!41;UBERON:0001890!1.83e-16!41;UBERON:0006240!1.83e-16!41;UBERON:0003080!4.91e-16!42;UBERON:0003056!6.16e-15!61;UBERON:0005743!1.69e-13!86;UBERON:0001017!2.37e-12!82;UBERON:0000073!5.69e-12!94;UBERON:0001016!5.69e-12!94;UBERON:0001049!2.22e-11!57;UBERON:0005068!2.22e-11!57;UBERON:0006241!2.22e-11!57;UBERON:0007135!2.22e-11!57;UBERON:0007023!5.46e-11!115;UBERON:0002616!6.18e-11!59;UBERON:0000200!3.55e-10!6;UBERON:0000476!3.84e-10!3;UBERON:0000920!3.84e-10!3;UBERON:0003075!6.18e-10!86;UBERON:0007284!6.18e-10!86;UBERON:0002771!1.71e-09!3;UBERON:0002346!2.16e-09!90;UBERON:0000955!6.11e-09!69;UBERON:0006238!6.11e-09!69;UBERON:0000153!4.51e-08!129;UBERON:0007811!4.51e-08!129;UBERON:0003112!4.66e-08!1;UBERON:0000032!4.66e-08!1;UBERON:0005253!4.66e-08!1;UBERON:0003128!4.66e-08!1;UBERON:0002241!4.66e-08!1;UBERON:0001703!4.66e-08!1;UBERON:0004761!4.66e-08!1;UBERON:0009617!4.66e-08!1;UBERON:0002902!6.10e-08!1;UBERON:0009899!6.10e-08!1;UBERON:0001882!7.45e-08!1;UBERON:0005403!7.45e-08!1;UBERON:0001871!9.26e-08!7;UBERON:0007190!9.72e-08!1;UBERON:0002022!1.35e-07!1;UBERON:0004121!1.75e-07!169;UBERON:0000033!2.44e-07!123;UBERON:0000924!3.07e-07!173;UBERON:0006601!3.07e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.04e-34;3!UBERON:0000920;5.04e-34;3!UBERON:0005631;2.87e-11;10!UBERON:0000158;2.87e-11;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.27e-34,3;UBERON:0003124,1.65e-15,7;UBERON:0005631,1.86e-08,14;UBERON:0000158,1.86e-08,14 | |||
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|short_description=p@chr5:80255192..80255201,+ | |||
}} | }} |
Latest revision as of 16:49, 30 July 2015
Short description: | p@chr5:80255192..80255201, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:80255192..80255201, + |
Coexpression cluster: | C981_choriocarcinoma_chorionic_pancreatic_placenta_amniotic_vagina_MCF7 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.27e-34 | 3 |
germ line cell | 1.91e-15 | 7 |
germ cell | 1.91e-15 | 7 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.27e-34 | 3 |
chorion | 1.65e-15 | 7 |
extraembryonic membrane | 1.86e-08 | 14 |
membranous layer | 1.86e-08 | 14 |