FFCP PHASE1:Hg19::chr5:78908349..78908360,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:78908349..78908360,+
|short_description=p5@PAPD4
|description=CAGE_peak_5_at_PAPD4_5end
|association_with_transcript=6bp_to_ENST00000502269_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=167153 | |EntrezGene=167153 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26776 | |HGNC=26776 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_ENST00000502269_5end | |||
|cluster_id=chr5:78908349..78908360,+ | |||
|description=CAGE_peak_5_at_PAPD4_5end | |||
|id=chr5:78908349..78908360,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.08e-52!172;CL:0000566!1.08e-52!172;CL:0000738!4.95e-50!140;CL:0000988!5.20e-50!182;CL:0002032!6.68e-49!165;CL:0000837!6.68e-49!165;CL:0002087!2.47e-40!119;CL:0002031!9.90e-40!124;CL:0000763!1.91e-33!112;CL:0000049!1.91e-33!112;CL:0000766!4.35e-30!76;CL:0000557!4.46e-29!71;CL:0002009!1.82e-26!65;CL:0002194!2.91e-25!63;CL:0000576!2.91e-25!63;CL:0000040!2.91e-25!63;CL:0000559!2.91e-25!63;CL:0000839!4.05e-25!70;CL:0002057!5.67e-21!42;CL:0000860!3.07e-19!45;CL:0000542!2.26e-13!53;CL:0000051!2.26e-13!53;CL:0000134!5.00e-13!358;CL:0000838!5.28e-13!52;CL:0002320!1.71e-12!365;CL:0000219!9.44e-12!390;CL:0000034!1.21e-09!444;CL:0000048!1.35e-09!430;CL:0000723!8.11e-09!436;CL:0000945!4.10e-08!24;CL:0000826!4.10e-08!24;CL:0000451!1.33e-07!10;CL:0000236!4.09e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.01e-24;33!CL:0002057;8.01e-24;33!CL:0000473;6.17e-23;39!CL:0000234;6.17e-23;39!CL:0000576;1.00e-21;48!CL:0000766;6.02e-19;69!CL:0002087;1.40e-15;104!CL:0000763;5.94e-15;100!CL:0000738;1.96e-14;136!CL:0000988;4.85e-13;177!CL:0000451;1.06e-09;10!CL:0000542;8.54e-09;53!CL:0000236;5.18e-08;13!CL:0000945;6.10e-08;24!CL:0000990;6.76e-08;8!CL:0000219;3.91e-07;193!CL:0000840;9.43e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.16e-73,168;CL:0000988,1.65e-71,177;CL:0000738,1.27e-69,136;CL:0002032,7.44e-68,161;CL:0000837,7.44e-68,161;CL:0002031,6.08e-56,120;CL:0002087,1.51e-55,115;CL:0000763,6.16e-50,108;CL:0000049,6.16e-50,108;CL:0000766,3.44e-46,72;CL:0000557,3.47e-44,67;CL:0002009,1.41e-40,61;CL:0000839,1.08e-39,66;CL:0002194,7.26e-39,59;CL:0000576,7.26e-39,59;CL:0000040,7.26e-39,59;CL:0000559,7.26e-39,59;CL:0000473,9.62e-33,48;CL:0000234,9.62e-33,48;CL:0000860,5.23e-29,42;CL:0002057,5.23e-29,42;CL:0000134,3.70e-17,354;CL:0002320,2.77e-16,361;CL:0000542,3.21e-15,53;CL:0000051,3.21e-15,53;CL:0000219,7.25e-15,386;CL:0000838,9.84e-15,52;CL:0000048,1.13e-10,427;CL:0000034,2.60e-10,441;CL:0000723,6.97e-10,433;CL:0000451,7.21e-10,10;CL:0000236,1.10e-08,14;CL:0000945,1.19e-08,24;CL:0000826,1.19e-08,24;CL:0000990,4.37e-08,8;CL:0000840,8.20e-07,5;CL:0001029,8.20e-07,5;CL:0000791,8.45e-07,18;CL:0000789,8.45e-07,18;CL:0002420,8.45e-07,18;CL:0002419,8.45e-07,18;CL:0000790,8.45e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;2.08e-21;42!CL:0000049;1.20e-13;108!CL:0000051;8.54e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.31e-34!102;UBERON:0003061!2.31e-34!102;UBERON:0002193!8.39e-33!112;UBERON:0002371!2.89e-27!80;UBERON:0001474!3.94e-26!86;UBERON:0004765!1.66e-21!101;UBERON:0001434!1.66e-21!101;UBERON:0002405!2.07e-19!115;UBERON:0002384!6.23e-12!375;UBERON:0003081!3.78e-10!216;UBERON:0002204!7.63e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.76e-07;15!UBERON:0000179;5.76e-07;15!UBERON:0000463;5.76e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.21e-49,98;UBERON:0003061,5.21e-49,98;UBERON:0002193,1.00e-46,108;UBERON:0002371,4.69e-40,76;UBERON:0002405,7.40e-40,93;UBERON:0001474,6.66e-35,82;UBERON:0004765,3.76e-30,90;UBERON:0001434,1.09e-25,100;UBERON:0003081,5.04e-17,203;UBERON:0002384,4.09e-16,371;UBERON:0002204,3.39e-09,167;UBERON:0000178,2.72e-07,15;UBERON:0000179,2.72e-07,15;UBERON:0000463,2.72e-07,15 | |||
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| ||
|short_description=p5@PAPD4 | |||
}} | }} |
Latest revision as of 21:35, 18 September 2015
Short description: | p5@PAPD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PAPD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000502269_5end |
EntrezGene: | PAPD4 |
HGNC: | 26776 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.21e-49 | 98 |
blood island | 5.21e-49 | 98 |
hemolymphoid system | 1.00e-46 | 108 |
bone marrow | 4.69e-40 | 76 |
immune system | 7.40e-40 | 93 |
bone element | 6.66e-35 | 82 |
skeletal element | 3.76e-30 | 90 |
skeletal system | 1.09e-25 | 100 |
lateral plate mesoderm | 5.04e-17 | 203 |
connective tissue | 4.09e-16 | 371 |
musculoskeletal system | 3.39e-09 | 167 |
blood | 2.72e-07 | 15 |
haemolymphatic fluid | 2.72e-07 | 15 |
organism substance | 2.72e-07 | 15 |