FFCP PHASE1:Hg19::chr5:55711409..55711446,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:55711409..55711446,+
|short_description=p@chr5:55711409..55711446,+
|description=CAGE_peak_at_chr5:55711409..55711446,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:55711409..55711446,+ | |||
|coexpression_cluster_id=C2236 | |||
|description=CAGE_peak_at_chr5:55711409..55711446,+ | |||
|id=chr5:55711409..55711446,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.74e-64!140;CL:0002057!1.53e-61!42;CL:0002087!2.31e-59!119;CL:0000766!5.28e-59!76;CL:0000860!1.50e-56!45;CL:0002032!4.25e-56!165;CL:0000837!4.25e-56!165;CL:0000037!1.57e-54!172;CL:0000566!1.57e-54!172;CL:0002031!2.82e-54!124;CL:0002194!8.74e-54!63;CL:0000576!8.74e-54!63;CL:0000040!8.74e-54!63;CL:0000559!8.74e-54!63;CL:0002009!1.09e-51!65;CL:0000988!2.87e-50!182;CL:0000839!3.82e-49!70;CL:0000557!4.17e-46!71;CL:0000763!2.85e-44!112;CL:0000049!2.85e-44!112;CL:0000236!8.87e-18!14;CL:0002393!1.53e-16!9;CL:0002397!1.53e-16!9;CL:0000945!4.05e-16!24;CL:0000826!4.05e-16!24;CL:0000134!3.45e-15!358;CL:0002320!1.74e-14!365;CL:0000219!1.44e-12!390;CL:0000094!1.37e-11!8;CL:0000542!1.20e-10!53;CL:0000051!1.20e-10!53;CL:0000838!6.98e-10!52;CL:0000048!1.21e-09!430;CL:0000723!3.12e-09!436;CL:0000034!1.06e-08!444;CL:0000081!4.69e-08!11;CL:0000875!6.79e-07!3;CL:0002396!6.79e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.15e-53;33!CL:0002057;4.15e-53;33!CL:0000576;2.03e-40;48!CL:0000473;5.83e-38;39!CL:0000234;5.83e-38;39!CL:0000766;2.66e-27;69!CL:0000236;1.86e-22;13!CL:0002087;4.69e-15;104!CL:0000738;2.94e-13;136!CL:0000875;3.05e-12;3!CL:0002396;3.05e-12;3!CL:0000763;1.22e-11;100!CL:0000945;2.11e-11;24!CL:0002393;1.23e-10;6!CL:0002397;1.23e-10;6!CL:0000771;4.10e-09;2!CL:0000094;1.72e-08;8!CL:0000219;1.20e-07;193!CL:0000988;2.16e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.27e-79,42;CL:0002057,1.27e-79,42;CL:0000473,1.04e-68,48;CL:0000234,1.04e-68,48;CL:0000766,2.50e-56,72;CL:0002194,1.98e-53,59;CL:0000576,1.98e-53,59;CL:0000040,1.98e-53,59;CL:0000559,1.98e-53,59;CL:0002009,1.85e-51,61;CL:0000738,2.94e-47,136;CL:0000839,4.80e-47,66;CL:0000557,3.06e-46,67;CL:0002087,4.61e-46,115;CL:0002031,8.97e-44,120;CL:0002032,1.89e-38,161;CL:0000837,1.89e-38,161;CL:0000037,1.89e-36,168;CL:0000763,6.21e-35,108;CL:0000049,6.21e-35,108;CL:0000988,4.13e-34,177;CL:0000236,1.02e-20,14;CL:0002393,2.79e-20,9;CL:0002397,2.79e-20,9;CL:0000875,2.78e-12,3;CL:0002396,2.78e-12,3;CL:0000134,3.57e-12,354;CL:0002320,9.54e-12,361;CL:0000945,2.16e-11,24;CL:0000826,2.16e-11,24;CL:0000219,3.02e-10,386;CL:0000771,3.43e-09,2;CL:0000094,1.58e-08,8;CL:0000048,2.05e-08,427;CL:0000723,3.66e-08,433;CL:0000034,7.74e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;9.71e-57;42!CL:0000049;5.31e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.08e-49!102;UBERON:0003061!4.08e-49!102;UBERON:0002193!1.01e-44!112;UBERON:0002371!2.65e-39!80;UBERON:0001474!1.46e-35!86;UBERON:0004765!3.59e-28!101;UBERON:0001434!3.59e-28!101;UBERON:0002405!8.13e-28!115;UBERON:0003081!2.12e-16!216;UBERON:0002384!1.57e-13!375;UBERON:0002204!8.70e-12!167;UBERON:0000178!1.56e-09!15;UBERON:0000179!1.56e-09!15;UBERON:0000463!1.56e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.10e-15;15!UBERON:0000179;1.10e-15;15!UBERON:0000463;1.10e-15;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.32e-50,98;UBERON:0003061,4.32e-50,98;UBERON:0002193,1.16e-44,108;UBERON:0002371,6.13e-40,76;UBERON:0001474,1.69e-36,82;UBERON:0004765,1.28e-32,90;UBERON:0002405,2.47e-31,93;UBERON:0001434,1.23e-28,100;UBERON:0003081,1.21e-19,203;UBERON:0000178,1.18e-15,15;UBERON:0000179,1.18e-15,15;UBERON:0000463,1.18e-15,15;UBERON:0002204,3.07e-14,167;UBERON:0002384,3.64e-11,371;UBERON:0000926,1.55e-09,315;UBERON:0004120,1.55e-09,315;UBERON:0006603,1.55e-09,315 | |||
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| ||
|short_description=p@chr5:55711409..55711446,+ | |||
}} | }} |
Latest revision as of 15:21, 30 July 2015
Short description: | p@chr5:55711409..55711446, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:55711409..55711446, + |
Coexpression cluster: | C2236_Eosinophils_Neutrophils_CD14CD16_CD14_Mast_Whole_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.32e-50 | 98 |
blood island | 4.32e-50 | 98 |
hemolymphoid system | 1.16e-44 | 108 |
bone marrow | 6.13e-40 | 76 |
bone element | 1.69e-36 | 82 |
skeletal element | 1.28e-32 | 90 |
immune system | 2.47e-31 | 93 |
skeletal system | 1.23e-28 | 100 |
lateral plate mesoderm | 1.21e-19 | 203 |
blood | 1.18e-15 | 15 |
haemolymphatic fluid | 1.18e-15 | 15 |
organism substance | 1.18e-15 | 15 |
musculoskeletal system | 3.07e-14 | 167 |
connective tissue | 3.64e-11 | 371 |
mesoderm | 1.55e-09 | 315 |
mesoderm-derived structure | 1.55e-09 | 315 |
presumptive mesoderm | 1.55e-09 | 315 |