FFCP PHASE1:Hg19::chr5:54763740..54763746,-: Difference between revisions
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|id=chr5:54763740..54763746,-
|short_description=p10@PPAP2A
|description=CAGE_peak_10_at_PPAP2A_5end
|association_with_transcript=371bp_to_ENST00000520263_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8611 | |EntrezGene=8611 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9228 | |HGNC=9228 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=371bp_to_ENST00000520263_5end | |||
|cluster_id=chr5:54763740..54763746,- | |||
|coexpression_cluster_id=C163 | |||
|description=CAGE_peak_10_at_PPAP2A_5end | |||
|id=chr5:54763740..54763746,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000188;2.31e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,2.19e-12,9 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.55e-98;1!UBERON:0003056;5.04e-34;3 | |||
|ontology_enrichment_disease=DOID:6193!4.66e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000941!2.89e-08!1;UBERON:0004904!2.89e-08!1;UBERON:0002464!2.89e-08!1;UBERON:0001021!2.89e-08!1;UBERON:0001785!2.89e-08!1;UBERON:0002022!9.10e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.55e-98;1!UBERON:0001785;1.55e-98;1!UBERON:0002464;1.55e-98;1!UBERON:0004904;1.55e-98;1!UBERON:0001021;1.55e-98;1!UBERON:0003714;3.52e-50;2!UBERON:0005162;3.52e-50;2!UBERON:0000122;3.52e-50;2!UBERON:0000010;2.31e-12;8!UBERON:0004732;5.49e-09;13!UBERON:0001134;1.49e-07;16!UBERON:0002036;1.49e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.55e-98,1;UBERON:0001785,2.55e-98,1;UBERON:0002464,2.55e-98,1;UBERON:0004904,2.55e-98,1;UBERON:0001021,2.55e-98,1;UBERON:0003902,2.55e-98,1;UBERON:0005425,2.55e-98,1;UBERON:0003714,4.52e-50,2;UBERON:0005162,4.52e-50,2;UBERON:0000122,4.52e-50,2;UBERON:0001781,7.14e-26,4;UBERON:0000966,9.07e-18,6;UBERON:0005388,9.07e-18,6;UBERON:0001802,9.07e-18,6;UBERON:0000010,2.45e-12,8;UBERON:0004732,5.70e-09,13 | |||
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|short_description=p10@PPAP2A | |||
}} | }} |
Latest revision as of 04:10, 18 September 2015
Short description: | p10@PPAP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PPAP2A_5end |
Coexpression cluster: | C163_Skeletal_skeletal_Pericytes_Hepatic_rhabdomyosarcoma_throat_mesenchymal |
Association with transcript: | 371bp_to_ENST00000520263_5end |
EntrezGene: | PPAP2A |
HGNC: | 9228 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 2.19e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.55e-98 | 1 |
cranial nerve | 2.55e-98 | 1 |
nerve trunk | 2.55e-98 | 1 |
nerve connecting eye with brain | 2.55e-98 | 1 |
nerve | 2.55e-98 | 1 |
retinal neural layer | 2.55e-98 | 1 |
presumptive neural retina | 2.55e-98 | 1 |
neural tissue | 4.52e-50 | 2 |
multi cell component structure | 4.52e-50 | 2 |
neuron projection bundle | 4.52e-50 | 2 |
layer of retina | 7.14e-26 | 4 |
retina | 9.07e-18 | 6 |
photoreceptor array | 9.07e-18 | 6 |
posterior segment of eyeball | 9.07e-18 | 6 |
peripheral nervous system | 2.45e-12 | 8 |
segmental subdivision of nervous system | 5.70e-09 | 13 |