FFCP PHASE1:Hg19::chr5:443268..443278,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:443268..443278,+
|short_description=p2@EXOC3
|description=CAGE_peak_2_at_EXOC3_5end
|association_with_transcript=0bp_to_ENST00000512944_5end
|EntrezGene=1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11336 | |EntrezGene=11336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30378 | |HGNC=30378 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P2E8 | |UniProt=Q6P2E8 | ||
|association_with_transcript=0bp_to_ENST00000512944_5end | |||
|cluster_id=chr5:443268..443278,+ | |||
|description=CAGE_peak_2_at_EXOC3_5end | |||
|id=chr5:443268..443278,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.37e-10!65;CL:0000557!1.66e-10!71;CL:0000839!2.83e-10!70;CL:0000763!5.32e-10!112;CL:0000049!5.32e-10!112;CL:0002057!7.86e-10!42;CL:0002194!7.88e-10!63;CL:0000576!7.88e-10!63;CL:0000040!7.88e-10!63;CL:0000559!7.88e-10!63;CL:0000860!1.42e-09!45;CL:0000766!4.74e-09!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.47e-09;33!CL:0002057;2.47e-09;33!CL:0000473;7.13e-08;39!CL:0000234;7.13e-08;39!CL:0000576;7.94e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,5.54e-12,67;CL:0002009,6.51e-12,61;CL:0000839,9.93e-12,66;CL:0002194,4.57e-11,59;CL:0000576,4.57e-11,59;CL:0000040,4.57e-11,59;CL:0000559,4.57e-11,59;CL:0000763,1.01e-10,108;CL:0000049,1.01e-10,108;CL:0000860,1.14e-10,42;CL:0002057,1.14e-10,42;CL:0000766,1.77e-10,72;CL:0000473,3.05e-10,48;CL:0000234,3.05e-10,48 | |||
|ontology_enrichment_development_v019=CL:0002057;1.19e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.34e-20!115;UBERON:0001049!1.17e-13!57;UBERON:0005068!1.17e-13!57;UBERON:0006241!1.17e-13!57;UBERON:0007135!1.17e-13!57;UBERON:0003080!1.39e-12!42;UBERON:0001893!1.46e-12!34;UBERON:0002020!1.54e-12!34;UBERON:0003528!1.54e-12!34;UBERON:0002780!4.15e-12!41;UBERON:0001890!4.15e-12!41;UBERON:0006240!4.15e-12!41;UBERON:0002791!4.77e-12!33;UBERON:0001869!5.79e-12!32;UBERON:0000955!1.40e-11!69;UBERON:0006238!1.40e-11!69;UBERON:0002616!3.04e-11!59;UBERON:0002390!4.11e-11!102;UBERON:0003061!4.11e-11!102;UBERON:0002619!1.69e-10!22;UBERON:0002371!4.01e-10!80;UBERON:0003075!5.64e-10!86;UBERON:0007284!5.64e-10!86;UBERON:0001950!2.01e-09!20;UBERON:0002193!2.17e-09!112;UBERON:0000153!2.39e-09!129;UBERON:0007811!2.39e-09!129;UBERON:0003056!3.88e-09!61;UBERON:0002346!5.28e-09!90;UBERON:0001474!5.43e-09!86;UBERON:0000033!5.48e-09!123;UBERON:0000062!5.59e-09!511;UBERON:0001017!1.54e-08!82;UBERON:0000956!1.71e-08!25;UBERON:0000203!1.71e-08!25;UBERON:0005743!2.96e-08!86;UBERON:0004765!1.95e-07!101;UBERON:0001434!1.95e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.24e-10;32!UBERON:0001893;2.59e-10;34!UBERON:0002619;2.60e-10;22!UBERON:0003528;2.83e-10;34!UBERON:0002020;2.83e-10;34!UBERON:0002791;2.89e-10;32!UBERON:0001950;4.27e-09;20!UBERON:0002780;1.27e-08;41!UBERON:0001890;1.27e-08;41!UBERON:0000956;9.87e-08;25!UBERON:0000203;9.87e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.70e-20,114;UBERON:0001049,1.38e-13,56;UBERON:0005068,1.38e-13,56;UBERON:0006241,1.38e-13,56;UBERON:0007135,1.38e-13,56;UBERON:0001893,1.03e-12,34;UBERON:0003528,1.09e-12,34;UBERON:0002020,1.09e-12,34;UBERON:0000073,1.84e-12,53;UBERON:0002616,1.84e-12,53;UBERON:0002390,3.09e-12,98;UBERON:0003061,3.09e-12,98;UBERON:0001869,4.51e-12,32;UBERON:0002780,5.52e-12,41;UBERON:0001890,5.52e-12,41;UBERON:0003080,5.52e-12,41;UBERON:0006240,5.52e-12,41;UBERON:0002791,6.01e-12,32;UBERON:0002371,1.33e-11,76;UBERON:0000955,2.19e-11,68;UBERON:0006238,2.19e-11,68;UBERON:0002619,4.06e-11,22;UBERON:0002193,1.62e-10,108;UBERON:0001474,3.68e-10,82;UBERON:0003075,5.13e-10,82;UBERON:0007284,5.13e-10,82;UBERON:0001950,5.72e-10,20;UBERON:0001017,3.70e-09,81;UBERON:0002405,3.71e-09,93;UBERON:0002346,4.25e-09,86;UBERON:0003056,8.22e-09,61;UBERON:0000956,2.06e-08,25;UBERON:0000203,2.06e-08,25;UBERON:0004765,4.40e-08,90;UBERON:0001434,1.61e-07,100;UBERON:0001016,4.41e-07,89 | |||
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| ||
|short_description=p2@EXOC3 | |||
}} | }} |
Latest revision as of 00:57, 18 September 2015
Short description: | p2@EXOC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EXOC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000512944_5end |
EntrezGene: | EXOC3 |
HGNC: | 30378 |
UniProt: | Q6P2E8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 5.54e-12 | 67 |
macrophage dendritic cell progenitor | 6.51e-12 | 61 |
myeloid lineage restricted progenitor cell | 9.93e-12 | 66 |
monopoietic cell | 4.57e-11 | 59 |
monocyte | 4.57e-11 | 59 |
monoblast | 4.57e-11 | 59 |
promonocyte | 4.57e-11 | 59 |
myeloid cell | 1.01e-10 | 108 |
common myeloid progenitor | 1.01e-10 | 108 |
classical monocyte | 1.14e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-10 | 42 |
myeloid leukocyte | 1.77e-10 | 72 |
defensive cell | 3.05e-10 | 48 |
phagocyte | 3.05e-10 | 48 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.70e-20 | 114 |
neural tube | 1.38e-13 | 56 |
neural rod | 1.38e-13 | 56 |
future spinal cord | 1.38e-13 | 56 |
neural keel | 1.38e-13 | 56 |
telencephalon | 1.03e-12 | 34 |
brain grey matter | 1.09e-12 | 34 |
gray matter | 1.09e-12 | 34 |
regional part of nervous system | 1.84e-12 | 53 |
regional part of brain | 1.84e-12 | 53 |
hematopoietic system | 3.09e-12 | 98 |
blood island | 3.09e-12 | 98 |
cerebral hemisphere | 4.51e-12 | 32 |
regional part of forebrain | 5.52e-12 | 41 |
forebrain | 5.52e-12 | 41 |
anterior neural tube | 5.52e-12 | 41 |
future forebrain | 5.52e-12 | 41 |
regional part of telencephalon | 6.01e-12 | 32 |
bone marrow | 1.33e-11 | 76 |
brain | 2.19e-11 | 68 |
future brain | 2.19e-11 | 68 |
regional part of cerebral cortex | 4.06e-11 | 22 |
hemolymphoid system | 1.62e-10 | 108 |
bone element | 3.68e-10 | 82 |
neural plate | 5.13e-10 | 82 |
presumptive neural plate | 5.13e-10 | 82 |
neocortex | 5.72e-10 | 20 |
central nervous system | 3.70e-09 | 81 |
immune system | 3.71e-09 | 93 |
neurectoderm | 4.25e-09 | 86 |
pre-chordal neural plate | 8.22e-09 | 61 |
cerebral cortex | 2.06e-08 | 25 |
pallium | 2.06e-08 | 25 |
skeletal element | 4.40e-08 | 90 |
skeletal system | 1.61e-07 | 100 |
nervous system | 4.41e-07 | 89 |