FFCP PHASE1:Hg19::chr5:43018230..43018260,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:43018230..43018260,+
|short_description=p1@ENST00000509036
|description=CAGE_peak_1_at_ENST00000509036_5end
|association_with_transcript=-270bp_to_ENST0000...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-270bp_to_ENST00000509036_5end | |||
|cluster_id=chr5:43018230..43018260,+ | |||
|coexpression_cluster_id=C616 | |||
|description=CAGE_peak_1_at_ENST00000509036_5end | |||
|id=chr5:43018230..43018260,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.08e-46!140;CL:0000988!2.10e-45!182;CL:0002031!4.14e-44!124;CL:0002087!1.14e-43!119;CL:0000037!2.69e-43!172;CL:0000566!2.69e-43!172;CL:0002032!1.61e-41!165;CL:0000837!1.61e-41!165;CL:0000766!3.47e-26!76;CL:0000839!6.05e-25!70;CL:0000860!8.85e-25!45;CL:0000557!1.29e-24!71;CL:0002057!7.49e-24!42;CL:0002194!2.17e-22!63;CL:0000576!2.17e-22!63;CL:0000040!2.17e-22!63;CL:0000559!2.17e-22!63;CL:0000763!7.32e-22!112;CL:0000049!7.32e-22!112;CL:0002009!1.36e-21!65;CL:0002320!5.79e-19!365;CL:0000838!7.95e-19!52;CL:0000542!1.47e-18!53;CL:0000051!1.47e-18!53;CL:0000134!1.54e-18!358;CL:0000219!6.03e-16!390;CL:0000048!8.30e-13!430;CL:0000723!1.25e-12!436;CL:0000034!1.49e-12!444;CL:0000791!1.13e-11!18;CL:0000789!1.13e-11!18;CL:0002420!1.13e-11!18;CL:0002419!1.13e-11!18;CL:0000790!1.13e-11!18;CL:0000084!5.50e-10!25;CL:0000827!5.50e-10!25;CL:0000236!2.29e-08!14;CL:0000945!3.64e-08!24;CL:0000826!3.64e-08!24;CL:0000625!8.50e-08!11;CL:0000003!1.69e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.83e-29;33!CL:0002057;1.83e-29;33!CL:0000473;6.20e-22;39!CL:0000234;6.20e-22;39!CL:0000576;7.15e-22;48!CL:0000791;4.07e-19;18!CL:0000789;4.07e-19;18!CL:0002419;4.07e-19;18!CL:0002087;1.31e-18;104!CL:0000766;7.81e-18;69!CL:0000084;1.06e-16;25!CL:0000542;1.21e-13;53!CL:0000625;2.04e-13;11!CL:0000738;1.92e-12;136!CL:0000236;7.71e-11;13!CL:0000763;3.34e-10;100!CL:0000988;3.14e-09;177!CL:0000624;8.33e-09;6!CL:0002393;2.23e-07;6!CL:0002397;2.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.81e-60,136;CL:0002087,3.29e-57,115;CL:0002031,1.46e-55,120;CL:0000988,6.39e-52,177;CL:0000037,1.84e-51,168;CL:0002032,3.39e-49,161;CL:0000837,3.39e-49,161;CL:0000860,1.74e-39,42;CL:0002057,1.74e-39,42;CL:0000766,3.65e-38,72;CL:0000473,2.02e-36,48;CL:0000234,2.02e-36,48;CL:0000557,1.05e-33,67;CL:0000839,1.31e-32,66;CL:0002194,1.08e-30,59;CL:0000576,1.08e-30,59;CL:0000040,1.08e-30,59;CL:0000559,1.08e-30,59;CL:0002009,3.32e-29,61;CL:0000763,1.22e-25,108;CL:0000049,1.22e-25,108;CL:0000838,1.41e-22,52;CL:0000542,6.37e-22,53;CL:0000051,6.37e-22,53;CL:0000791,3.33e-19,18;CL:0000789,3.33e-19,18;CL:0002420,3.33e-19,18;CL:0002419,3.33e-19,18;CL:0000790,3.33e-19,18;CL:0000084,1.01e-16,25;CL:0000827,1.01e-16,25;CL:0002320,1.08e-15,361;CL:0000134,1.43e-15,354;CL:0000625,1.86e-13,11;CL:0000219,1.49e-12,386;CL:0000236,1.29e-11,14;CL:0000034,3.22e-10,441;CL:0000048,1.41e-09,427;CL:0000723,1.81e-09,433;CL:0000624,7.34e-09,6;CL:0002393,4.61e-08,9;CL:0002397,4.61e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.99e-28;42!CL:0000790;4.07e-19;18!CL:0000051;1.21e-13;53!CL:0000049;9.44e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.60e-29!112;UBERON:0002390!7.69e-29!102;UBERON:0003061!7.69e-29!102;UBERON:0002371!6.24e-23!80;UBERON:0001474!1.55e-22!86;UBERON:0002384!2.41e-19!375;UBERON:0002405!2.77e-17!115;UBERON:0004765!3.28e-17!101;UBERON:0001434!3.28e-17!101;UBERON:0003081!1.57e-10!216;UBERON:0002204!2.06e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.09e-33,98;UBERON:0003061,2.09e-33,98;UBERON:0002193,1.37e-29,108;UBERON:0002371,4.40e-29,76;UBERON:0001474,3.19e-28,82;UBERON:0002405,2.42e-25,93;UBERON:0004765,3.27e-24,90;UBERON:0001434,3.81e-20,100;UBERON:0002384,5.53e-15,371;UBERON:0003081,1.50e-10,203;UBERON:0002204,4.50e-08,167 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,0.522371256399677,0,0,0,0,0.123766352960047,0.994192127183747,0,0.602694528023977,0,0,0.123121058076788,0.816002764977012,0,0.286235987131057,0.136874425072884,0,0.534893840235659,0.410502947249729,0.393553906568396,2.75354993794233,3.83829398097213,4.95411594611443,0,0.90361775633475,0,0.0774672005803016,0.142169232487422,1.46800219667424,1.10799081706375,6.61796676651468,6.51032612147556,0.895661896959697,1.29557466407592,0.257575567634187,2.4717700592526,2.64513160582167,2.66842467306598,1.85943229524548,0.411167888021826,1.23882548358041,8.05538698502021,7.94098190240212,7.56743135643473,3.7922024881028,1.29096936716765,5.41705946377367,3.38836211176688,1.36453075028923,2.69668181334102,11.9372718024652,5.45579346029359,11.5080682643827,5.60747210317417,10.5715738539465,7.6720455095885,5.22376629531451,1.70215567407342,3.11411124497787,5.27622197039161,5.73631210262222,9.77349801173025,4.23779651843358,2.57794345191295,2.84816148696796,2.32380814943136,2.76385589954557,1.67726916406701,3.14520167210186,3.00353785683013,0.964353520182481,2.85012743741249,0.79566670879636,2.00930569141097,1.75996244461323,4.36910889009705,2.66852776159066,4.26730222566507,3.2031678962881,4.02326707968138,4.62731410949403,1.90810750907073,6.26134266020393,6.45960908308033,6.11637165000366,6.60856642895129,6.1655941927969,1.58030450865046,3.73748563216283,8.25322601773246,9.86887195197644,3.34372990781356,4.88883399950386,7.101717086021,13.6378709885538,1.44833593950726,2.65145316727353,2.21533894583621,2.97884250141517,2.94610035369053,3.90178042679635,3.4531959966772,4.97430032014527,0.579606171470105,2.52087157375503,5.08327573370455,1.04535523804977,1.58633079776593,7.2811893784365,6.52892146416997,4.55435445635105,3.50421955756506,2.60433381542567,1.90090408889675,2.10805166708882,2.30375900077953,2.49861453104692,2.36777252044017,5.74789597844733,13.9108652825065,17.918493117495,11.2963035028583,0,0,0.12786256184353,0,0,0.144846518960824,0,1.45990461090791,0.189069634328136,0.443458794925128,0.263504357079378,0.130979075497713,0,0,0,0,0.531831842075461,1.66943437013739,0,0.371457501329565,0.198762407366705,0.860234595106124,0,0.56530794192401,0.419499436209906,0.550236083880135,1.04497483268405,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.357198913136319,0.44905874525234,0.337834441449967,0,0.949265659568129,0.183201743930407,1.31780417436063,0,0,1.49091585508596,0,0,0,0.709336764396714,0.560677600142307,1.06748995729705,0,0,0.134710672069688,0.163461903113459,0,0,0,0.624320153660641,0.570471821544449,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0.368502951935304,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0.612975591598039,0.300476117813194,0.113432183160021,0.538168907066586,0.640672166455702,0.423863802319124,0.300091096084402,0.103052529238439,0,0.744467425326359,0,0,0.252433774244115,0.276149695926898,0.323292113637624,0.710019185033229,0.302256294682921,0.169560592310488,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,3.12899064659632,1.28648187638577,1.38134921352481,0,0,1.65629520055781,0.505754070234305,1.92808823906786,1.10293972732394,1.30727666455444,0.71181185733329,1.75280700608214,1.17732879075208,1.15424147083917,0.738155454624648,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0,0.109750285408626,0,0,0,0,3.11980435583874,0,0,0,0.144366447761074,0.462985512576611,0.380508304469197,3.95102198979638,2.57545848628462,0,0,0.297262324577456,0,0,0,0,0,0,0.492663237895943,1.84901711427775,4.14656231081544,8.35895729818376,5.17593977048158,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0.845302752556,0,0,0.257207374262142,0,0.532844358032199,0,1.08524321078289,0.823240336780769,0,0,0,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0.239624855491583,0,0,0,0.205476322550383,0,0.672510863961164,15.5654300559523,19.4064817373566,16.299565607528,0,0,0,0,0,0,2.99161459204025,1.24324654030811,0,0.500170521059677,0,0,0,0,0.117141414992713,0,0,3.10419213877515,0,0.368738337083406,0.173767228936166,1.37060810223918,1.02943027143257,2.27444828735176,5.82428342210265,3.52200940751366,0.303127571446259,0,0,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0.160853921143607,0,0,0.355123450626254,0,0,0.232420756919918,0.120859449591622,0.200506470303285,0.0920809889358963,0,0.364182336013434,0.131124414959424,0,0,0,1.46139224653261,0.105551628892876,2.27466768141793,0.850468526382578,0,1.54227252690289,0.812839312631559,0.501689773854853,0,0,0.447749509444357,0.877039506583738,0.261435451024901,0,0.328014645699706,0,0.206082023295445,1.55668090191184,0.330037999682352,0,0,0,0.48335359146061,0.616194468458578,0.15350367472613,0,0.214840489736547,0.435050081742686,0,0,0,0,0,0.30347334256665,0.464845549297286,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0.255897791311334,0.42793898803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| ||
|short_description=p1@ENST00000509036 | |||
}} | }} |
Latest revision as of 14:57, 30 July 2015
Short description: | p1@ENST00000509036 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000509036_5end |
Coexpression cluster: | C616_CD14_Natural_CD8_Basophils_Mast_Eosinophils_CD4 |
Association with transcript: | -270bp_to_ENST00000509036_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.09e-33 | 98 |
blood island | 2.09e-33 | 98 |
hemolymphoid system | 1.37e-29 | 108 |
bone marrow | 4.40e-29 | 76 |
bone element | 3.19e-28 | 82 |
immune system | 2.42e-25 | 93 |
skeletal element | 3.27e-24 | 90 |
skeletal system | 3.81e-20 | 100 |
connective tissue | 5.53e-15 | 371 |
lateral plate mesoderm | 1.50e-10 | 203 |
musculoskeletal system | 4.50e-08 | 167 |