FFCP PHASE1:Hg19::chr8:24773140..24773144,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4741 | |EntrezGene=4741 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7734 | |HGNC=7734 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-34bp_to_ENST00000522503_5end | |association_with_transcript=-34bp_to_ENST00000522503_5end | ||
|cluster_id=chr8:24773140..24773144,+ | |||
|coexpression_cluster_id=C261 | |coexpression_cluster_id=C261 | ||
|description=CAGE_peak_20_at_NEFM_5end | |description=CAGE_peak_20_at_NEFM_5end |
Latest revision as of 15:39, 17 September 2015
Short description: | p20@NEFM |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_NEFM_5end |
Coexpression cluster: | C261_locus_medial_parietal_pons_diencephalon_olfactory_spinal |
Association with transcript: | -34bp_to_ENST00000522503_5end |
EntrezGene: | NEFM |
HGNC: | 7734 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p20@NEFM |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 2.56e-98 | 2 |
frontal cortex | 4.68e-66 | 3 |
gyrus | 9.87e-34 | 6 |
locus ceruleus | 4.32e-26 | 2 |
brainstem nucleus | 4.32e-26 | 2 |
hindbrain nucleus | 4.32e-26 | 2 |
brain grey matter | 2.23e-23 | 34 |
gray matter | 2.23e-23 | 34 |
neocortex | 5.49e-22 | 20 |
regional part of cerebral cortex | 3.62e-20 | 22 |
Showing 1 to 10 of 43 entries